| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2044 |
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| Symbol | |
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| ID | 6161952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2220827 |
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| End bp | 2222122 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664813 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001791076 |
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| Protein GI | 171058727 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0798972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG ACGACACGCT GGACCCGGCG CTGCGCAGCT GGCTCGAATC GGCCAATGCG
GCGGACACCG ACTTCCCGAT CCAGAACCTG CCGTTCGGTC GCTTCCGGCT GGCGGGTGAA
ACCGCGAGCG CCTGGCGCAT CGGCGTGGCG ATCGGCGACC AGGTGCTCGA CCTCCGGCGC
GCCGGCCTGA TCGAGCATGG CGACATGGCC CGGCTGATGT CCGCCTCCGC CTCCGTTGCC
GATCGCCGCG CGCTGCGCCG GGCGATCTCG GCGGGCTTGC GTGAAGGCAG TGCGCAGCGG
GCGACGTTCA GCGAGGCGCT GCTGCCGCAG GCCGCGGTGC AGATGGGCCT GCCGTGCGAG
ATCGGCGACT ACACCGACTT CTACACCGGC ATCCACCACG CCACCACCGT CGGCAAGCTG
TTCCGGCCCG AGGCCCCGCT GCTGCCCAAC TACAAGTGGG TGCCGATCGG CTATCACGGC
CGGGCCTCGT CGATCGTGGC GAGCGGCCAG GACTTCCACC GCCCGCTCGG CCAGGTCAAG
GCCGCCGATG CCGAGGCGCC GGTGCTGCGC CCGAGCGGCC GGCTCGACTA CGAGCTGGAG
CTGGGCATCG TGATGGCGCG GCCCAATGCG CTGGGCGAGC CGGTGCCGAT GGCTGCGGCC
GAGGACCACG TGTTCGGTCT CACGCTGCTC AACGATTGGA GCGCACGCGA CCTGCAGGCC
TGGGAATACC AGCCGCTCGG GCCCTTCCTG TCGAAGAACT TCGCCAGCAC CGTGTCGCCG
TGGATCGTCA CGCTGGAGGC GCTGCAGCCG TTTCGCGCGC CGCCCGAGCG CCCGGCGGGC
GATCCGCTGC CGCTGCCGTA TCTGGATTCG CCGTACAACC GCGAAGCCGG CGCGATCGAC
ATCACGCTCG AAGTCTGGCT GCAGACCGCC GCGATGCGTC GTGCGGGCCT GGCCGCGCAG
CGGCTCAGCA CGTCCAACTA CCGCGACGCC TACTGGACGC TGGCGCAGCT GGTGGCGCAC
CACACCGTCA ACGGCTGCAA CCTGCGCAGC GGCGATCTGC TGGGCACCGG CACCTTGTCC
GGCCCGCAGC CTGATCAAGC CGGCTCGCTG CTCGAACTGA GCCTGGGCGG CCAGCAGCCG
GTCACGCTGG CCAACGGCGA ACAGCGGCGC TTTCTGGAGG ACGGCGACAG CGTGATCCTG
CGCGCCTACT GCGAGCGGGA TGGCCACCGG CGCATCGGTT TCGGCGAATG CATCGGCACC
GTGCTGCCGG CGCGCCAACT TGAAGGAGCG ACGTGA
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| Protein sequence | MSFDDTLDPA LRSWLESANA ADTDFPIQNL PFGRFRLAGE TASAWRIGVA IGDQVLDLRR
AGLIEHGDMA RLMSASASVA DRRALRRAIS AGLREGSAQR ATFSEALLPQ AAVQMGLPCE
IGDYTDFYTG IHHATTVGKL FRPEAPLLPN YKWVPIGYHG RASSIVASGQ DFHRPLGQVK
AADAEAPVLR PSGRLDYELE LGIVMARPNA LGEPVPMAAA EDHVFGLTLL NDWSARDLQA
WEYQPLGPFL SKNFASTVSP WIVTLEALQP FRAPPERPAG DPLPLPYLDS PYNREAGAID
ITLEVWLQTA AMRRAGLAAQ RLSTSNYRDA YWTLAQLVAH HTVNGCNLRS GDLLGTGTLS
GPQPDQAGSL LELSLGGQQP VTLANGEQRR FLEDGDSVIL RAYCERDGHR RIGFGECIGT
VLPARQLEGA T
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