| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2040 |
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| Symbol | |
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| ID | 6161948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2217037 |
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| End bp | 2217831 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664809 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001791072 |
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| Protein GI | 171058723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0865072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCG CCCAGAACCT CGAGATCACG TTCAACCCCG GCACCCCGAT CGAGAACCGC
GTGCTGCGCG GCCTCGACCT CGAGATCCCG ACCGGCCAGT TCGTCACCGT CATCGGCTCC
AACGGCGCCG GCAAGTCGAC CTTTTTGAAC GCCGTCAGCG GTGACCTGAT GGTCGACCGC
GGCACCATCC ACATCGACGA CACCGACGTT ACCCGCCGCG CCGCCTGGCA GCGTTCGGAC
CTGGTCGCCC GGGTGTTTCA AGACCCGATG GCCGGCACCT GCGAGAGCCT GACGATCGAG
GAAAACATGG CGCTGGCCTG GAAACGCGGC GCCGGCCGCG GCCTGGGTTT TTCGCTCAAC
CGCCACCTGC GCGAGCTGTT CCGCGACAAG CTGTCGATCC TGAAGCTGGG CCTCGAAAAC
CGCCTGGCCG ACCGCATCGG CCTGCTGTCG GGCGGCCAGC GCCAGGCGGT GAGCCTGCTG
ATGGCGTCGC TGCAGCCGTC GCGCATCCTG CTGCTCGACG AGCACACCGC CGCGCTCGAT
CCCAAGACCG CCGCCTTCGT GCTCGAACTC ACCGACCGCA TCGTCGAAGG CGCGAAGCTG
ACCGCGATGA TGGTCACGCA CAGCATGCGC CAGGCGCTCG ACCACGGCTC GCGCACCGTG
ATGCTGCACG AGGGGCGCGT GATCCTGGAT GTGTCCGGCC CGCAGCGCGC CGGCATGGAC
GTGGCCGACC TGCTGCACCT GTTCGAGCAG ACCCGCGGCG AAAAGCTCGA CGACGACAAG
CTGCTGCTGG CGTGA
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| Protein sequence | MLRAQNLEIT FNPGTPIENR VLRGLDLEIP TGQFVTVIGS NGAGKSTFLN AVSGDLMVDR
GTIHIDDTDV TRRAAWQRSD LVARVFQDPM AGTCESLTIE ENMALAWKRG AGRGLGFSLN
RHLRELFRDK LSILKLGLEN RLADRIGLLS GGQRQAVSLL MASLQPSRIL LLDEHTAALD
PKTAAFVLEL TDRIVEGAKL TAMMVTHSMR QALDHGSRTV MLHEGRVILD VSGPQRAGMD
VADLLHLFEQ TRGEKLDDDK LLLA
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