| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2039 |
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| Symbol | |
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| ID | 6161947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2216096 |
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| End bp | 2217037 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664808 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001791071 |
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| Protein GI | 171058722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0264556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCA TCGCCTCCCT GGGCGCGCTT GAAATCGGTC TGATCTTCGG ACTGGTCGCG
CTCGGCGTCT TCCTGTCGTT TCGCATCATC AACTTCCCCG ACCTCACGGT CGACGGCAGC
TTCCCGCTCG GCGGCGCGGT CGCCGCGGCG CTGATCGTCG CCGGCTGGAA CCCGTTTGCC
GCCACCGCGA TGGCGGTCGT GGCCGGCGCG CTGGCCGGCT ACCTGACGGC CTGGCTCAAC
GTGCGGCTGC GCATCATGCA GTTGCTGGCC AGCATCCTGG TGATGATCGC GCTGTACTCG
ATCAACCTGC GCGTGATGGG CAAGCCCAAC ATCGCGCTGA TCAACGACCC GACCGTCTTC
AGTCTGCTTG CCTTTGGCGA CCTGCCCGAC TACTGGCTCA AGCCGCTCGC GCTGCTGGCC
ATCGTGGCGA TCGCCAAGAT CGGCATCGAC CTGTTCTTCG CGTCCGAACT GGGCCTGGCG
ATGCGCGCCA CCGGCGGCAA CCCGCGCATG GCCCGGGCGC AGGGCATCTC GACCGACCGG
CTGACGTTGT GGGGCCTGGC GCTGTCGAAC GCGCTGGTGG CACTGGCCGG TGCGCTGTTC
GTGCAGACCC AGGGCGGCGC CGACATCTCG ATGGGCATCG GCACCATCGT GATCGGCCTG
GCCGCGGTGA TCATCGGCGA GACGCTGCTG CCCGCCCGCA CCCTGGTGCT GACCACCCTG
GCCTGCATCC TGGGTGCGGT GCTCTACCGC TTCTTTATCG CCACTGCGCT CAACAGCGAT
TTCCTCGGCC TGCAGGCGCA GGACCTGAAC CTCGTCACCG CGCTGCTGGT CGCCCTGGCG
CTGCTGATCC CGTCCTACAA GCGCAAGCTC GCGGCGTTGT TTCCGGCTGC GTCCGGCTCC
GCCAAGACGG CCCGCGTTTC CACCCTGAAG GAGGCCCGCT GA
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| Protein sequence | MSLIASLGAL EIGLIFGLVA LGVFLSFRII NFPDLTVDGS FPLGGAVAAA LIVAGWNPFA
ATAMAVVAGA LAGYLTAWLN VRLRIMQLLA SILVMIALYS INLRVMGKPN IALINDPTVF
SLLAFGDLPD YWLKPLALLA IVAIAKIGID LFFASELGLA MRATGGNPRM ARAQGISTDR
LTLWGLALSN ALVALAGALF VQTQGGADIS MGIGTIVIGL AAVIIGETLL PARTLVLTTL
ACILGAVLYR FFIATALNSD FLGLQAQDLN LVTALLVALA LLIPSYKRKL AALFPAASGS
AKTARVSTLK EAR
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