| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2034 |
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| Symbol | |
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| ID | 6162262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2210149 |
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| End bp | 2211075 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664803 |
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| Product | muramoyltetrapeptide carboxypeptidase |
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| Protein accession | YP_001791066 |
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| Protein GI | 171058717 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.146137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG CATTCGCCCA CGACCTGGGT ACCCTGCACC TCTACAGCCC GTCGGGCGTG
GTGATGGCGG CGCCCGCCCT GCGGCGCGCG GCCAAGCGGC TGCAGGCCTA CGGCTTCGAG
GTGTCGATCG ACGCCGACGC GCTGGCCCGC CACCAGCGTT TTGCCGGCGA CGACGACCTG
CGCCTGGCCG CCTTGCACCG CGTGGCCGAG GCCGCCCCCA CGGTGGCGCT GGCCACGCGC
GGCGGTTACG GCCTGACGCG GCTGCTCGAC CGCATCGACT GGCCGCTGCT GGCGCGTGCG
GTGGCGCGCG GCACGCACTG GGTCGGCTAC AGCGACCAGA CGGCGCTGCA CCTGGGCCTG
CTGGCGCACA CCAAGGCGCC GAGCTGGCAC GGCCCGCTGG CGGTCGACGA CTTCGGCCGC
AGCGTGGCCG AGGGCGGGCT CGACGAGGTG ACGCCCGACT GCTTCATCGA GGCGGTCAGC
GGCGAGCTGG AGGCGGTGGG TTTCCGTACC GAAGAAGGTC ACGACGGCCT CGACGTCAAG
GGCCTGCTGT GGGGCGGCAA CCTGACGGTG CTGTGCTCGC TGCTGGGCAC GCCGCACTGG
CCGAAGGTCA AGGGCGGCAT CCTGTTCCTC GAAGACATCA ACGAGCACCC GTACCGGGTC
GAACGCATGC TGATGCAGCT GCAGCAGGCC GGCGTGCTGG CGGCGCAGAA GGCGGTGCTG
CTGGGCGATT TCGGCGGCTG GCGCAAGAGC CCGCTCGACC GCGGCTACAA CGTCAAGTCG
ATGGTCGCGC AGGTGCGGGC GATGACCTCC ACCCCGGTGC TGACCGGCCT GCCGATCGGC
CATGTGCCGA CCAAGGTGAC GCTGCCGGTG GGGATCAAGG CGCAGCTGGT GATCGAAGGG
CGTGACGCCC TGGTGGCCTG GGGCTGA
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| Protein sequence | MTEAFAHDLG TLHLYSPSGV VMAAPALRRA AKRLQAYGFE VSIDADALAR HQRFAGDDDL
RLAALHRVAE AAPTVALATR GGYGLTRLLD RIDWPLLARA VARGTHWVGY SDQTALHLGL
LAHTKAPSWH GPLAVDDFGR SVAEGGLDEV TPDCFIEAVS GELEAVGFRT EEGHDGLDVK
GLLWGGNLTV LCSLLGTPHW PKVKGGILFL EDINEHPYRV ERMLMQLQQA GVLAAQKAVL
LGDFGGWRKS PLDRGYNVKS MVAQVRAMTS TPVLTGLPIG HVPTKVTLPV GIKAQLVIEG
RDALVAWG
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