| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2026 |
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| Symbol | |
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| ID | 6163575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2199145 |
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| End bp | 2200374 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664795 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_001791058 |
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| Protein GI | 171058709 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAGA CCGTCGCCAA ATCCAGCAAG CTCGCCAACG TGTGCTACGA CATCCGCGGC
CCCGTGCTGG AGAAGGCCCG CCAGATGGAG GAAGAGGGCC ACAAGATCAT CAAGCTCAAC
ATCGGCAACC TCGCCGTGTT CGGGCTCGAG CCGCCCGACG AGATCGTGCA GGACATGATC
CGCAACATGC CGCACGCTGC GGGCTACACC GACAGCAAGG GCCTGTTCGC GCCGCGCAAG
TCGGTGGTGC ACTACACGCA GGAGAAGGGC GTCAAGGGCG TCACCGTCGA TGACGTCTAT
CTGGGCAACG GCGCCTCCGA GCTGATCGCC ATGAGCATGA ACGCGCTGCT CGACGACGGC
GACGAGGTGC TGATCCCGTC GCCCGACTAC CCGCTCTACA CCGCGGTGGT GGCGCTGTCG
GGCGGCAAGC CGGTGCACTA CATGTGCGAC GAGCAAGCCG AGTGGATGCC CGACATCGCC
GACATCCGCC GCAAGATCAC GCCCAACACC CGCGCGATCG TCGTCATCAA CCCGAACAAC
CCGACCGGCG CGCTCTACCC CGACAGCGTG CTGCTGGAGC TGATCGAGGT GGCCCGCCAG
CACCAGCTGA TCATCTTTGC CGACGAGATC TACGACAAGA CGCTCTACGA CGGCCACACC
CACACCAGCA TCGCGGCGTT GGCCGACGAC GTGCTGATCC TGACCTTCAA CGGCCTGAGC
AAGAACTACC GCTCCTGCGG CTACCGCGCC GGCTGGATGG TGGTGTCGGG CGACAAGCGC
CATGCGCGCG ACTACATCGA AGGTCTGAAC ATGCTGGCCT CGATGCGCCT GTGCGCCAAC
ACGCCCGGCC AGCTGGCAAT CCAGACCGCG CTGGGCGGCT ACCAGAGCAT CAAGGACCTG
GTGGTGCCGA CCGGCCGCTT GTGCCGCCAG CGCGACCTCG CGCACAAGCT GCTGAGCGAG
ATTCCGGGCG TCACCTGCGT CAAGCCCAAG GCGGCGCTCT ACATGTTCCC GCGGCTCGAC
CCCAAGATGT ACCCGATTGC CGACGACCAG CAGTTCGCCT ACGAACTGCT GGCCGAAGAG
AAGGTGCTGA TCGTCCAGGG CACCGGCTTC AACTGGCCCA CGCCCGACCA TTTCCGGCTC
GTCTTCCTGC CCAATTCGGA CGACCTGACC GACGCGGTGA GCCGCATCGC GCGTTTCCTC
GACCACTACC GCAAGCGCCA CAGCGCCTGA
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| Protein sequence | MLKTVAKSSK LANVCYDIRG PVLEKARQME EEGHKIIKLN IGNLAVFGLE PPDEIVQDMI
RNMPHAAGYT DSKGLFAPRK SVVHYTQEKG VKGVTVDDVY LGNGASELIA MSMNALLDDG
DEVLIPSPDY PLYTAVVALS GGKPVHYMCD EQAEWMPDIA DIRRKITPNT RAIVVINPNN
PTGALYPDSV LLELIEVARQ HQLIIFADEI YDKTLYDGHT HTSIAALADD VLILTFNGLS
KNYRSCGYRA GWMVVSGDKR HARDYIEGLN MLASMRLCAN TPGQLAIQTA LGGYQSIKDL
VVPTGRLCRQ RDLAHKLLSE IPGVTCVKPK AALYMFPRLD PKMYPIADDQ QFAYELLAEE
KVLIVQGTGF NWPTPDHFRL VFLPNSDDLT DAVSRIARFL DHYRKRHSA
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