| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2000 |
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| Symbol | |
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| ID | 6162406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2165809 |
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| End bp | 2166330 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664769 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791032 |
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| Protein GI | 171058683 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000000379085 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATCA CGATGTCCCG TGCCAGCCTG CCGGTGTTCT GCACCGCGTT GCGCAATCTC
GACCACTGCC TCGGCAAGGC GGCCGCGTAC GCGCAGCAGC GCAAGTTCGA CGTCAACGTG
CTGGTGTCGA TGCGCCTGGC GCCCGACATG CTGCCGTTCG CGTCGCAGAT CCGCATCGCC
TGCGATGCGG CCAAGCTGTG CGTGGCCCGC CTCGGCGGGC TCGACGCGCC GAAGTTCGAC
GACACCGAGT CGACCTTCGC CGAACTGCGC GAGCGCATTG CCCGCACGCT GGCCTGGCTC
GACAGCGTGC CGGCCGACGT GCTGGACGGC ACCGAGGACA AGGAGATCAC CTTCCCGGTC
GGGCGTGACA AGACCCGCAC GATGAAGGGC GAGGACTACC TCCGGCACTG GGCGCTGCCC
AACGTGTTCT TTCACGTCAC GATGGCGTAC GCGCTGCTGC GCCACAACGG CGTCGATCTG
GGCAAGATCG ACTACCTGCT CGGCGCCGAT CAGCCGGCCT GA
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| Protein sequence | MSITMSRASL PVFCTALRNL DHCLGKAAAY AQQRKFDVNV LVSMRLAPDM LPFASQIRIA
CDAAKLCVAR LGGLDAPKFD DTESTFAELR ERIARTLAWL DSVPADVLDG TEDKEITFPV
GRDKTRTMKG EDYLRHWALP NVFFHVTMAY ALLRHNGVDL GKIDYLLGAD QPA
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