| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1977 |
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| Symbol | |
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| ID | 6160740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2145157 |
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| End bp | 2146275 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664746 |
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| Product | phosphoribosylformylglycinamidine cyclo-ligase |
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| Protein accession | YP_001791009 |
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| Protein GI | 171058660 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
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| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0188023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCG ATGCCGCCAC CGGCACCCTG AGCTACGAAC AAGCCGGCGT CAACTACGAC
CTGATCGACC CGCTCAAGGT CACGGCCCAG CGCGCCGCGG CCTCCACCGC CAGCCAGCTG
GCGCACCACG GTTTCACCGA AGTGGCCGCC TCGCGCGGCG AATCGGCCTA TGTGGTCGAC
GTCGGGCCGT TCTACCTCGC CTCGATCGTC GAGTGCCTGG GCACCAAGAC GCTCGTCGCC
GACGAGATGG CGCGCCTGAC CGGCAAGAGC TGGTACGACG CCATCGCGCA AGACACCATC
GCGATGGCCA TCAACGACCT GATCACGGTC GGCGCCACGC CGCTGGTGGT GCAGGCCTAC
TGGGCCGCCG GCGGCTCCGA CTGGTTCGGC GACGACCAGC GCTCGCAGGC GCTGGTGGCC
GGCTGGAAGC GCGCCTGCGA GGTCTGCCAG GTCGCCTGGG GCGGCGGCGA AACCCCGGCG
CTGGCCGGCA TCGTCGAAGA AGGCCGCATC GACCTGGCGG CCTCGTGCAC CGGCCTGATC
AACCCGAAGG AGCGCCTGTC GGTGGGCGAC AAGCTCGCCG CCGGCGACGC CATCGTGCTG
CTGGCGTCGA GCGGCATCCA CGCCAACGGC CTGAGCCTGG CGCGCAAGCT GGTCGAGCGC
CTGCCCGACG GCTACCTGAC CGAGATCGCC CCCGGGCTGA CGTACGGCGC GGCGCTGCTG
GCGCCCACCA CGCTCTATTC GCCGGTCACC GAGGCGCTGT TCAAGGCCGG CATCACGCCG
CACTACTGCG CCAACATCAC CGGCCACGGC TGGCGCAAGC TGCTGCGCCA TCCGGCCGAA
CTGAGCTACC GCATCCACAC GGTGCCGCCG GTGACGCCGG TGCTGCGCTT CATCCAGCAG
CAGGCGCAGC AGGACGACCG CGAGGCCTAC AGCACGCTCA ACATGGGCGC GGGTTTCGCG
ATCTTCGTGG CCGCCGAAGA CGCCGAGCGC ACGGTCGAGA TCGCCCGCGC GCAGGGCATC
GCGGCCTGGG TGGCCGGCGA GGTCGAGGCC GGTGCCAAGC GCCTGCAGAT CGAGCCGCTG
GACATCGAGT TCGGCAACGA CGACCTGCAG CTGCGTTGA
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| Protein sequence | MPGDAATGTL SYEQAGVNYD LIDPLKVTAQ RAAASTASQL AHHGFTEVAA SRGESAYVVD
VGPFYLASIV ECLGTKTLVA DEMARLTGKS WYDAIAQDTI AMAINDLITV GATPLVVQAY
WAAGGSDWFG DDQRSQALVA GWKRACEVCQ VAWGGGETPA LAGIVEEGRI DLAASCTGLI
NPKERLSVGD KLAAGDAIVL LASSGIHANG LSLARKLVER LPDGYLTEIA PGLTYGAALL
APTTLYSPVT EALFKAGITP HYCANITGHG WRKLLRHPAE LSYRIHTVPP VTPVLRFIQQ
QAQQDDREAY STLNMGAGFA IFVAAEDAER TVEIARAQGI AAWVAGEVEA GAKRLQIEPL
DIEFGNDDLQ LR
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