| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1953 |
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| Symbol | |
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| ID | 6162035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2116417 |
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| End bp | 2117142 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664722 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790985 |
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| Protein GI | 171058636 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGAC ATTCCAAGTG GGCAAACATC CAGCATCGCA AAGGCCGCCA GGACGAGAAG
CGCGGCAAGA TCTGGACCCG CATCATTCGT GAAATCACGG TGGCCGCGCG CCAGGGCGGC
GCCGACACCT CGATGAACCC GCGCCTGCGC CTGGCCATCG ACAAGGCCAA GGCGGCCAAC
ATGCCGGCCG ACCGCATCAA GTACAACGTC GACAAGGCCT CGGGCAACCT CGAAGGGGCC
AACTACGAGG AAATCCGCTA CGAGGGCTAC GGCATCGGCG GCGCGGCGGT CATCATCGAC
ACCATGACCG ACAACCGCGT GCGCACCGTC GCCGAGGTGC GGCATGCCTT CAGCAAGTAC
GGCGGCAACC TGGGCACCGA AGGCTCGGTG GCGTTCCAGT TCAAGCACTG CGGCCAGCTG
GTGTTCGCGC CCGGCACGTC GGAGGACAAG CTGATGGACG TCGCCCTCGA AGCCGGCGCC
GAGGACGTGA TCACCGGCGA CGACGGCTCG ATCGAGGTGC TGACCGGCCC GACCGATTTC
GAGGCCGTGA AGGAGGCCCT CGAGGCCGCC GGCCTGAAGG CCGAGATCGC CGACGTGACG
ATGCGCGCCG AGAACACCAT CGAGCTCAGC GGCGACGATG CCCAGCGCAT GCAGAAGCTG
CTCGACGTGA TCGAGGACCT GGACGACGTC CAGGCGGTCT ATCACAACGC CCTGATCGAA
TCGTGA
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| Protein sequence | MAGHSKWANI QHRKGRQDEK RGKIWTRIIR EITVAARQGG ADTSMNPRLR LAIDKAKAAN
MPADRIKYNV DKASGNLEGA NYEEIRYEGY GIGGAAVIID TMTDNRVRTV AEVRHAFSKY
GGNLGTEGSV AFQFKHCGQL VFAPGTSEDK LMDVALEAGA EDVITGDDGS IEVLTGPTDF
EAVKEALEAA GLKAEIADVT MRAENTIELS GDDAQRMQKL LDVIEDLDDV QAVYHNALIE
S
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