| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1949 |
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| Symbol | |
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| ID | 6162031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2112655 |
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| End bp | 2113407 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664718 |
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| Product | iojap-like protein |
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| Protein accession | YP_001790981 |
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| Protein GI | 171058632 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
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| TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC GCAAGCTGCA ACGCGCCATC GTCGATGGCC TTGAAGACGT CAAGGGCCAG
GACATCGTGG TCTTCAACAC CGAGCATCTC TCCGCGCTGT TCGAGCGCGT GGTGGTCGCT
TCGGGCACCA GCAACCGCCA GACCAAGGCG CTCGCCGCCA GCGTGCGCGA CGCCGTGCGC
GACATCGGCG GCCGGGTGCT GAGCGTCGAA GGCACCGACA ACGGCGAATG GATCATCGTC
GACTGTGGCG AGGCCGTGGT GCACATCATG CAACCGGCGA TCCGCCAGTA CTACCACCTC
GAGGAGATCT GGGGCGGCAA GCCGGTCAAG ATGAAACTCG CCGGTGAAGG CCGCGGTCTG
GTCAAGGCCG GTGCCGACGA CGAGGACGAG GCGCCGGCGC CCAAGCGCAA GGCAGCGAGC
AAGAAGGCGG CGGCCGAGCC GGTCGAGGAC AAGCCCACGG CCCGCAAGCC TGCGGCGAAG
AAGGCCGTGG CGAAGAAGGC CGCGACCGCC AAGCCGGCCG CCGGGACGAC GGTTGCGGCC
AAGAAGGCGC CCGCTCGCAA GAAGGCGGCC GAGCCGACCG TCATCAAGAC GATCGTCATC
AAGCCGGGTT CGGGCAACAA GGTCGTCGCC CGCAAGGTGG CGGCCGAACG GGCTGCCGCC
AAGAAGGCGC CGGCCCGACG GGTGCGCGCC GAGATCGCGG CCGAAACCGC ACCGGCCCGC
AAGTCGCCGG CACGCAAGAC GCCTCGCTCC TGA
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| Protein sequence | MDIRKLQRAI VDGLEDVKGQ DIVVFNTEHL SALFERVVVA SGTSNRQTKA LAASVRDAVR
DIGGRVLSVE GTDNGEWIIV DCGEAVVHIM QPAIRQYYHL EEIWGGKPVK MKLAGEGRGL
VKAGADDEDE APAPKRKAAS KKAAAEPVED KPTARKPAAK KAVAKKAATA KPAAGTTVAA
KKAPARKKAA EPTVIKTIVI KPGSGNKVVA RKVAAERAAA KKAPARRVRA EIAAETAPAR
KSPARKTPRS
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