| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1940 |
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| Symbol | |
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| ID | 6162546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2104436 |
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| End bp | 2105224 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664709 |
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| Product | UBA/THIF-type NAD/FAD binding protein |
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| Protein accession | YP_001790972 |
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| Protein GI | 171058623 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.333296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG TCACGCCGAC GCCCGACGTC GACGCCGATC TCGAACGCCG CTTCGGCGCA
CTGCGCCGAC TGTGGGGCGA GCCGGCATAT CTCAGGGTCA GACAGGCCAA GGTGGCCATC
GTCGGGCTCG GCGGTGTCGG CTCGTGGTGC GCCGAAGCAC TGGCACGCTG TGGTGTCGCG
CAGCTGGTGC TGATCGATCT GGACCAGATC GCCGAGTCGA ACATCAACCG GCAGGTTCAG
GCACTGGGCA GCACGGTCGG TGCTGCGAAG GTCGAGATGC TGGCGCGCCG CATTGCCGAC
ATCCATCCGC TGTGCGGGGT GCACGCCATC GAGGAGTTCG TCGAGGCCGA CAACTGGCCG
GCGCTGTTGC CCGGGCCGGT CGACGTGGTC GTCGACGCCT GCGACCAGGG ACGCGCCAAG
CTCCTGCTGG CGCAATGGGC GCTGACCGGA CGCCACAAGC TGGTTTCGGT GGGCGCGGCC
GGTGGGAAGA CATCGCCGCA GGCGGTTCAG GTCGACGATC TGGCCAAGGT CACGCACGAT
CCGCTGCTGG CGCGCCTGCG CCAGCATCTG CGCCGCGACG GCGCGCCACG CACCGGCGAC
ATCGGGGTGC GATGTGTCTA TTCCCGCGAA TCCGTGGTGC GGCCAGACAA CGGCTGCGAT
GTCGATGGCA ACCTGAACTG CCACGGCTAC GGATCATCGG TGACGGTGAC CGCGACCTTC
GGCATGGTCG CGGCTGAAGC AGCGATGGCC TGGGTCAGGG CGTGCGATGC GCAGGGGGGG
CTTGAATGA
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| Protein sequence | MNLVTPTPDV DADLERRFGA LRRLWGEPAY LRVRQAKVAI VGLGGVGSWC AEALARCGVA
QLVLIDLDQI AESNINRQVQ ALGSTVGAAK VEMLARRIAD IHPLCGVHAI EEFVEADNWP
ALLPGPVDVV VDACDQGRAK LLLAQWALTG RHKLVSVGAA GGKTSPQAVQ VDDLAKVTHD
PLLARLRQHL RRDGAPRTGD IGVRCVYSRE SVVRPDNGCD VDGNLNCHGY GSSVTVTATF
GMVAAEAAMA WVRACDAQGG LE
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