| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1938 |
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| Symbol | |
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| ID | 6163692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2100181 |
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| End bp | 2100972 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664704 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001790970 |
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| Protein GI | 171058621 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.251082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGT TTCCACCAGC TGGCGCCCGC GGCATGTCGC GTTCGCTCGC CCTCTTCATC
TGCAGCGCCG TCACGATGGG TTCGACGGCA TCGGCACAGG AAGCGGTCAA CGCTGCGGCC
GTCCTGACCG AGAACCCCTA CGGCCTGGCC GCACTGTGGG CGGGCAGCGA CGTCGTCGCC
AAGATCGTGC TGATGCTGAT GACGGTGATG TCGGCCGGCA GCTGGTACGT GATCGTCGTC
AAGCTGCTCG AGCAGGCGCG GGTCGGCCGG CAGGCGCAGG AAGCGCAGGA CCGTTTCTGG
CGTGCCGGCG ACGTGCGCCA GGGCGCCGAT GCGCTGAGCG TGGGCAGCCC GTTCCGCTTC
ATCGCCGAGG CCGGTGCCGA AGCCAGCCGC AAGCACGACG GCCTGCTGGG CCAGATCGAC
CTGAACACCT GGGTGACGAT GTCGATCCAG CGCGCCGTCG AGCGGGTGCA CAGCCGGCTG
CAAGGCGGGC TGGCGTTTCT GGCCACGGTC GGTTCCACGG CGCCGTTCGT GGGTCTGTTC
GGCACGGTCT GGGGCATCTA TCACGCGCTC ACCGCCATCG GCGTGGCCGG GCAGGCCTCG
ATCGACAAGG TCGCCGGCCC GGTGGGTGAG GCGCTGATCA TGACGGCCAT CGGCCTGGCC
GTGGCGGTGC CGGCGGTGCT GGGCTACAAC TGGCTAGTGC GGCGCAACAA GGTCGCGATG
GACGATGTAC GCGCCTTCGG CAGCGACCTG CACGCGGTGC TGCTGGCTCA GGCCAACGCG
GCCGCGCGCT GA
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| Protein sequence | MSLFPPAGAR GMSRSLALFI CSAVTMGSTA SAQEAVNAAA VLTENPYGLA ALWAGSDVVA
KIVLMLMTVM SAGSWYVIVV KLLEQARVGR QAQEAQDRFW RAGDVRQGAD ALSVGSPFRF
IAEAGAEASR KHDGLLGQID LNTWVTMSIQ RAVERVHSRL QGGLAFLATV GSTAPFVGLF
GTVWGIYHAL TAIGVAGQAS IDKVAGPVGE ALIMTAIGLA VAVPAVLGYN WLVRRNKVAM
DDVRAFGSDL HAVLLAQANA AAR
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