| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1933 |
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| Symbol | |
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| ID | 6160438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2096550 |
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| End bp | 2097767 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664699 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790965 |
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| Protein GI | 171058616 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.272354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGC AGACCATCCC GCCCGCCTCG TCCGGCCTCG TTTCCGCGCC CCCGCAGGCC
CCGCCGTGCC GGTCGTGGGA CATCTTCTGT CGTGTCATCG ACAACCACGG CGACCTGGGC
GTGTGCTGGC GCCTGGCGGT CGACCTGGCG CAGCGTGGCC AGCGTGTGCG CCTGTGGATC
GACGACGCCA GCGCGCTGGC CTGGATGGCC CCGACCGGCG CGAACGGCGT GAGCGTGCGG
CCCTGGGCCG AGCCGTCGGT CGACGACGTG CCGGGCGATG CGGTGATCGA GGCTTTCGGC
TGCGATCCGC CGGCCGGCTT TGTCGAACGC ATGGCGCAGC GCGGCGTCGC GCCGCTGTGG
ATCAACCTCG AATACCTCAG CGCCGAAGCC TACGTGGCGC GCTCGCACCG CCTGCAGTCG
CCGCAGTGGA GCGGGCCGGG CCGCGGTCTG ACGAAATGGT TCTTCTATCC CGGCTTCACG
CCCGACACCG GCGGCCTGTT GCGCGAGCCG GGCCTGATCG AGCGGCGACG GCTGCATCAG
GCGGCGGCCG GAGATGGCGC CGAGGCGCTG GTCATCACGC TGTTCTGCTA CGCCAACGCC
GCCCTGCCCT CGCTGCTGGA TGCGCTGGTC GATCTGCCCG ACACGGCGCA GCCCGGTGGC
GTCCGGCTCA AGGTCACACC GGGCTGGGCG GCCACGCAGG TGGTGCGTTG GCTCGGTTCA
ACCGAGGCAC CCGACGCCGG CACGGTGGTC CGCCGCGGCC GTCTCGACAT CGAGTTCCTG
CCCTACCTCA GCCAGGCCGG ATTCGACGAG TTGCTGTGGC GCAGCGACCT GAACCTGGTG
CGCGGCGAAG ACTCGCTGGT GCGCGCGCTG TGGGCCGGCC GGCCGATGCT GTGGCAGGTC
TATCCGCAAG ACGACGGCGC CCATCTGCGC AAGCTCGATG CTTTCCTGCA GCGCTATTTC
GGGGTCGCCG ACGGGCTTGA CATGGCCGCC GTCCGGCTCG ATGTTCAACA GGTCTGGCAG
GCCTGGAACG GCGCCGAGTC CCCGCCGTCC GTGGCGCAGT GGCACCGGTT GCTGGCTGCC
CTGCGCGGCG ACTGGTGCAG GGCTTCGGAG GCGGTCTGCG GGCGGTTGTC AGCGCGGCCG
GACCTGACGT CGTCACTGCT CGAATTCGCG GCCGACCACA CCCCCGAACG GGCGGGTGCC
GCCGACCGTC TAGAATAG
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| Protein sequence | MPVQTIPPAS SGLVSAPPQA PPCRSWDIFC RVIDNHGDLG VCWRLAVDLA QRGQRVRLWI
DDASALAWMA PTGANGVSVR PWAEPSVDDV PGDAVIEAFG CDPPAGFVER MAQRGVAPLW
INLEYLSAEA YVARSHRLQS PQWSGPGRGL TKWFFYPGFT PDTGGLLREP GLIERRRLHQ
AAAGDGAEAL VITLFCYANA ALPSLLDALV DLPDTAQPGG VRLKVTPGWA ATQVVRWLGS
TEAPDAGTVV RRGRLDIEFL PYLSQAGFDE LLWRSDLNLV RGEDSLVRAL WAGRPMLWQV
YPQDDGAHLR KLDAFLQRYF GVADGLDMAA VRLDVQQVWQ AWNGAESPPS VAQWHRLLAA
LRGDWCRASE AVCGRLSARP DLTSSLLEFA ADHTPERAGA ADRLE
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