| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1932 |
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| Symbol | uvrC |
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| ID | 6160437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2094439 |
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| End bp | 2096517 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664698 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001790964 |
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| Protein GI | 171058615 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0596454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG CCACCCCCGA GACCACCGAC GCACTGGCCA AGCTGGCCGG CGAGAACCTG
CCGGACGCCG TTGCCGCGCC CGCCGAGGAG ACTGCGGCCC AGGCCATCGA CGCCGCCGCT
GCGCGCGCGC AGGTCTGGCA GCGCCTGCTC GCCGAGGTGG CCAGCCTGCC GAGCCTGCCG
GGCGTCTATC GCTACTTCGA TGCCGGCAAC CAGCTGCTCT ACGTCGGCAA GGCGCTGAGC
CTGAAGAAGC GCGTCTCGAG CTACTTCCAC AAGGACCACG GCGGCAGCCG AATCGGCCAC
ATGGTCGGCA AGATCCACCG GATCGAGACC ACCGTGGTGC GCTCGGAGGC CGAGGCCCTG
CTGCTCGAAA ACAACCTGAT CAAGACGCAG AACCCGCGCT TCAACATCCT GTTCCGGGAC
GACAAGAGCT ACCCCTACCT GAAGCTGGTG ACGCACGAGT ACCCGCGCGT GGCGTATTTC
CGCGGTGCGG TCGATCGCCG GCATCGCTAT TTCGGGCCGT ACCCGAGCGC CTGGGCGGTC
AAGGAAGGCA TCCAGCTGCT GCAGAAGGTG TTCCGGCTGC GCACCTGCGA GGACACGGTG
TTCGCCAACC GCACGCGGCC CTGTCTGCTC TACCAGATCC GCCGCTGCTC GGGCCCTTGC
GTGCAGGCCA TCAGCGCCGA GGCCTACGCC GCCGACGTGC GCAACGCCGT GCGCTTTCTC
GACGGCCAGG CGCAGGAGGT GCTCGACGGC CTGCAGACGC AGATGATGGT GGCGGCCGAG
GCGCTGGCGT TCGAGAAGGC GGCCGAGATC CGCGACCAGC TCGGCGCGCT GTCGAAGGTG
CTGCATCAGC AGTCGATGGA AACCGGCGAG GCCGGCGATG TCGACATCCT GGCCGTCAAG
GTGCAGGGCG GGCGGGCCTG CGTGAACCTG GCGATGGTGC GCGGCGGGCG TCACCTCGGC
GACCGGGCGT ACTTTCCGAC TCACGTCGAT GACGCCGTCG CGCTGGCGCA CGAGGAAGAA
TCCGCAGAGC CGGAAGCCGG CACGCCGTCG ACCCCCGAAC CGGCCCCGGC TGCGTCCGAC
GCTGCAGTGG GCTCCAGCCT CGGGCAGGCC GAGCGTGCGG TGCTGCAGGC GTTCCTGGCG
CAGCACTATC TGGGCGCCGA CTGTCCGCCC CTGCTGATCA CCAGCCTGCC GGTCGATCGC
GACCTGATCG CCGCCCTGGC CGGCAACGCC GGCCACAAGG TGGTGGCCCA GCACCAGCCG
CGCGAAGACC GCCGCGCCTG GCTCGACATG GCGATCAAGG GCTGCGAGCT GGCCCTGGCC
CGGCTGCTGG CCGAAGAGGG CTCGCAGCAG GCGCGCACCC GCGCGCTGGT CGAGGCGCTC
GACCTCGCGC CCGAGGGCAT GGACGGCGGT CTCGACAGCC TGCGCATCGA GTGTTTCGAC
GTCAGCCACA CCCAGGGCGA AGCGACCCAG GCCTCGTGCG TGGTGTTCGA AAACCACCGC
ATGCAGCCGG CGCAGTACCG GCGCTTCAAC ATCGCCGGCA TCCAGGGCGG CGACGACTAC
GCGGCGATGC GCCAGGTGCT GACGCGCCGC TATTCGAAGC TGGCCGAAGC GGCCCAGTCG
GGCGAGGGCC GCCTGCCCGA TCTGGTGCTC ATCGATGGCG GGCGCGGCCA GGTGGGCGTC
GCGAAAGAGG TCTTCCAGCA GCTCGGGCTC GATCTGGCAC TGATCGTCGG GGTCGAGAAA
GGCGAGGGCC GCAAGGTCGG GCTCGAGGAA CTGGTGTTCG CCGACGGCCG CGAGAAGGTC
TACCTCGGCC GCGATTCGGC CGCCCTGATG CTGGTGGCGC AGATCCGCGA CGAGGCTCAC
CGCTTCGCGA TCACCGGCAT GCGCGCCAGG CGGGCCTCGG TGCGCACCGG TGGCAGCCGG
CTCGAAGACA TCGCCGGCAT CGGGCCGAAG AAGCGCGCCC GGCTGCTGCA GCGCTTCGGC
GGCGTGCGCG GCGTGGCGCA GGCGAGCGTC GAGGATCTGG CCTCGGTCGA GGGCATCTCG
CCCGAACTGG CCGAGCAGAT CTACCAGGCG CTGCGCTGA
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| Protein sequence | MNPATPETTD ALAKLAGENL PDAVAAPAEE TAAQAIDAAA ARAQVWQRLL AEVASLPSLP
GVYRYFDAGN QLLYVGKALS LKKRVSSYFH KDHGGSRIGH MVGKIHRIET TVVRSEAEAL
LLENNLIKTQ NPRFNILFRD DKSYPYLKLV THEYPRVAYF RGAVDRRHRY FGPYPSAWAV
KEGIQLLQKV FRLRTCEDTV FANRTRPCLL YQIRRCSGPC VQAISAEAYA ADVRNAVRFL
DGQAQEVLDG LQTQMMVAAE ALAFEKAAEI RDQLGALSKV LHQQSMETGE AGDVDILAVK
VQGGRACVNL AMVRGGRHLG DRAYFPTHVD DAVALAHEEE SAEPEAGTPS TPEPAPAASD
AAVGSSLGQA ERAVLQAFLA QHYLGADCPP LLITSLPVDR DLIAALAGNA GHKVVAQHQP
REDRRAWLDM AIKGCELALA RLLAEEGSQQ ARTRALVEAL DLAPEGMDGG LDSLRIECFD
VSHTQGEATQ ASCVVFENHR MQPAQYRRFN IAGIQGGDDY AAMRQVLTRR YSKLAEAAQS
GEGRLPDLVL IDGGRGQVGV AKEVFQQLGL DLALIVGVEK GEGRKVGLEE LVFADGREKV
YLGRDSAALM LVAQIRDEAH RFAITGMRAR RASVRTGGSR LEDIAGIGPK KRARLLQRFG
GVRGVAQASV EDLASVEGIS PELAEQIYQA LR
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