| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1917 |
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| Symbol | |
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| ID | 6159874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2077034 |
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| End bp | 2077837 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664681 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_001790949 |
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| Protein GI | 171058600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0748746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT CCATCAAGAC CGCTGCCGAC ATCGAGGGCA TGCGCGTGGC AGGCCGCCTG
GCTTCCGAGG TGCTCGACAT GCTGACGCCG CATGTGCGCG CCGGCATCAC CACCAACGAG
CTCGACCGCC TGGCGCACGA CTACACCGTG CACGAGCAGA AGGCGATTCC CGCGCCGCTG
AACTACGCGC CGCCGGGCTA CAAGCCCTAC CCCAAGTCGG TCTGCACGTC GATCAACCAT
CAGGTCTGCC ACGGCATCCC GAACGATCGG GCGCTCAAGA ACGGCGACAT CGTCAACATC
GACGTCACCG TGATCAAGGA CGGCTGGCAC GGCGACACCA GCCGCATGTT CATCGTCGGC
GAGGCCTCGA TCGCCGCCAA GCGGCTGTGC CAGCTCACCT ACGAGTCGAT GTGGAAGGGC
ATCATGAAGG TCAGGCCCGG CGCACGCCTG GGCGACATCG GCCACGCGAT CCAGACCTTC
GTCGAGAACC AGGGCCTGTC GGTGGTGCGC GAGTTCTGCG GCCACGGCAT CGGCCGCAAG
TTCCACGAGG ACCCGCAGAT CCTGCACTAC GGCCGCCCCG GCACGCTCGA CACCCTGGTG
CCGGGCATGG TGTTCACGAT CGAGCCGATG GTCAACGCCG GCCGGCGCGA GATCAAGGAA
TCCGGCGACG GCTGGACCAT CGTCACCAAG GACCGCTCGC TGTCGGCGCA GTGGGAACAC
ACGCTCGTCG TCACCGAAAC CGGCTACGAA GTGCTGACCC TGTCGGCCGG CAGCCCGCCG
ATTCCCGATT TCGTGAACGC CTGA
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| Protein sequence | MTISIKTAAD IEGMRVAGRL ASEVLDMLTP HVRAGITTNE LDRLAHDYTV HEQKAIPAPL
NYAPPGYKPY PKSVCTSINH QVCHGIPNDR ALKNGDIVNI DVTVIKDGWH GDTSRMFIVG
EASIAAKRLC QLTYESMWKG IMKVRPGARL GDIGHAIQTF VENQGLSVVR EFCGHGIGRK
FHEDPQILHY GRPGTLDTLV PGMVFTIEPM VNAGRREIKE SGDGWTIVTK DRSLSAQWEH
TLVVTETGYE VLTLSAGSPP IPDFVNA
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