| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1912 |
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| Symbol | |
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| ID | 6160307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2068723 |
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| End bp | 2069535 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664676 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_001790944 |
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| Protein GI | 171058595 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.148488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATCA AGGCCGCCGT GATGGGCATC GTGGAGGGCT TCACCGAGTT CCTGCCGATC
TCCAGCACCG GTCACCTGAT CCTCACAGGG TCCTTGCTCG GATTCACCGA CGCCAAGAGC
AAGGTTTTCG ACATCGCGAT TCAGACCGGC GCCATTTTCG CCGTGATCCT GGTTTATTGG
CAGCGCATTG CCAGTACCGC GCGCGGACTG GGCTCCGACG CCCGCGCCCG CCGCTTCGCG
CTCAACGTGC TGATCGGCTT TCTGCCGGCC GCCGTCGCGG GCCTGCTGCT GGGCAAGGCG
ATCAAGTCCC ACCTGTTCAC CCCCGAGATC GTGGCCGCGG CTTTCATCGT CGGCGGCATG
ATCATCCTGT GGGTCGAACG CCGCCCCGAC ACCCGGATCC GCGTGGCCAC GATCGACGAC
ATGAACCACG CCGACGCACT GAAGGTGGGC CTGATCCAGT GCGTGGCCAT GATCCCCGGC
ACCAGCCGCT CCGGCGCCAC CATCATCGGC GGGATGATGC TGGGGCTGTC GCGCCAGGCG
GCAACCGATT TCAGCTTCTT CCTCGGCATC CCGACGCTGA TCGGCGCAGG CGCCTACAGC
CTCTGGAAAG AGCGGGCCCT GCTGTCGGCG CAGGACCTGC CGATGTTCGG TGTCGGCCTG
CTGTTTTCGT TCATCTCGGC CTTGCTGTGC ATCCGCTGGC TGCTGCGTTA CGTGGCCACG
CACAACTTCG TGCCGTTCGC CTGGTACCGC ATCGCCTTCG GCATCGTGGT GCTGGCGACC
TCTTACAGCG GCCTGATCGT CTGGAGCGAG TGA
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| Protein sequence | MLIKAAVMGI VEGFTEFLPI SSTGHLILTG SLLGFTDAKS KVFDIAIQTG AIFAVILVYW
QRIASTARGL GSDARARRFA LNVLIGFLPA AVAGLLLGKA IKSHLFTPEI VAAAFIVGGM
IILWVERRPD TRIRVATIDD MNHADALKVG LIQCVAMIPG TSRSGATIIG GMMLGLSRQA
ATDFSFFLGI PTLIGAGAYS LWKERALLSA QDLPMFGVGL LFSFISALLC IRWLLRYVAT
HNFVPFAWYR IAFGIVVLAT SYSGLIVWSE
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