| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1904 |
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| Symbol | |
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| ID | 6159804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2060690 |
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| End bp | 2061466 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664667 |
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| Product | silent information regulator protein Sir2 |
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| Protein accession | YP_001790936 |
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| Protein GI | 171058587 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0865072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC CGCAGAGCCG GCATCCGTTG CGGGACCTGC GCGTCCGCCT GCGTCACGCC
GGGCGCATCT GCGTGTTCAG CGGCGCGGGC ATGTCGGCCG AGAGCGGCAT CCCGACCTTT
CGTGATGCGC AGACCGGCCT GTGGGCCCGG TTCGACCCGA TGCAGCTCGC CAGCGCCGAA
GGCTTTCGTG CCGATCCGGC GCAGGTCTGG GACTGGTATG CGATGCGTCG CGAGGGCGTG
CGCCAGGCGC AGCCCAACGC CGGGCATGTT GCGCTGGCGG CGTATGCGCG CCGGCATCCG
GGGCGCCTGC GCATCGTCAC GCAGAACGTC GACGACCTGC ACCAGCGTGC CGGCTGTGCC
GAGGTGATCC GCCTGCACGG CGACATCCTG GCCGATCGGT GGCTCGATCC CTGTGCGCAT
GCGGGCGCTG CCGACGCGCC GGTGTGCGAG GTCGATCCGG CCGCACCCGA TGCCCGGCCG
CCGCGCTGCC GGCATTGCGG CAACCTGCTG CGCCCGGCGG TGGTGTGGTT CGGTGAAAAC
CTGCCGTACG ACGCACTGAC GGCGGCCGAG GCTGCGGTCT CCGAGGCCGA CGTGCTGCTG
GTGGTGGGCA CGTCGGGTTC GGTCTGGCCG GCGGCGGGGC TGGTGGCGCG CGCACGCCAT
GCCGGCGCGC ACGTGGTGAT CATCAATCCG CAAGCCACCG AGATCGACGA GGAGGCGCAC
CTGGTCCTGA GCGCTACGGC GGCCCGGATG CTGCCGCGAT TGTTCGACCC CCTGTAG
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| Protein sequence | MSLPQSRHPL RDLRVRLRHA GRICVFSGAG MSAESGIPTF RDAQTGLWAR FDPMQLASAE
GFRADPAQVW DWYAMRREGV RQAQPNAGHV ALAAYARRHP GRLRIVTQNV DDLHQRAGCA
EVIRLHGDIL ADRWLDPCAH AGAADAPVCE VDPAAPDARP PRCRHCGNLL RPAVVWFGEN
LPYDALTAAE AAVSEADVLL VVGTSGSVWP AAGLVARARH AGAHVVIINP QATEIDEEAH
LVLSATAARM LPRLFDPL
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