| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1903 |
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| Symbol | |
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| ID | 6159803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2059959 |
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| End bp | 2060693 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664666 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001790935 |
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| Protein GI | 171058586 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0247051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAA ACAGCCTGCT TTTTGGATTC CACGCCGTCA CGGTGCGCGT CAAGACCGCG
CCCGCCTCGG TGCTCGAGGT GCATGTCGAT CCGGCCCGGC GCGACGCGCG CATGCGCCAG
TTCGTCGCGC GGGTCGAGGC CGCCGGCATC AGGCTGATCG AGACCGACGA CAAGCGCCTC
GGCCAGATGG CCGGCAACAC GCGCCACCAG GGCGTGGTCG CGCGGGTCAA CGTGCTGGCG
CCGATCCACT CGCTCGACGA TCTGCTCGAT GCCGTCGAGG GTCCGCCGCT GGTCCTGGTG
CTCGACGGCG TGACCGATCC GCACAACCTC GGCGCCTGCC TGCGCGTGGC CGACGGGGCT
GGCGCCCACG CGGTGATCGC GCCCAAGGAC CACGCCGTCG GTGTCAACGC CACGGTCGCC
AAGGTCGCCA GCGGAGCCGC CGAGACGGTG CCGTACTTCA TGGTGACGAA CCTGGCGCGC
ACGCTCAACG AACTGAAGGA ACGCGACATC CGCGTCATCG GCACCAGCGA GGACGCCACC
CAGTCGATCT ACGACATCGA CCTGAGCGGC CCGGTCGCGA TCGTGCTCGG TGCCGAAGGC
CCCGGCATGC GCCAGCTCAC GCGCAAGACC TGCGACGAGC TCGTGCACAT CCCGATGCGC
GGCGCGGTCG AGAGCCTGAA CGTGTCGGTC GCGTCGGCGG TGTGCCTCTA CGAAGCCCTG
CGGCAGCGCC AATGA
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| Protein sequence | MSANSLLFGF HAVTVRVKTA PASVLEVHVD PARRDARMRQ FVARVEAAGI RLIETDDKRL
GQMAGNTRHQ GVVARVNVLA PIHSLDDLLD AVEGPPLVLV LDGVTDPHNL GACLRVADGA
GAHAVIAPKD HAVGVNATVA KVASGAAETV PYFMVTNLAR TLNELKERDI RVIGTSEDAT
QSIYDIDLSG PVAIVLGAEG PGMRQLTRKT CDELVHIPMR GAVESLNVSV ASAVCLYEAL
RQRQ
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