| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1877 |
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| Symbol | |
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| ID | 6160377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2029109 |
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| End bp | 2030095 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664639 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001790909 |
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| Protein GI | 171058560 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.10744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGGC TCGTGCTGCT GGTGCTGCTG CTGGTCGCCG GCGCGGCGGC GGCGCTGCAT
TGGCTGAACC GGCCGCTGGC GCTGCGCCAG GATCCGATCG AGCTGCAGAT CGAGCCCGGC
GACTCGCCGC GCGACATCGC CGCCCATCTG GTCGAAGCGG GCGTGCAGAC CGATGCCTGG
CTGCTGTACC AGTGGTTCCG CTGGTCGGGG GATGCCCGCC GCATCCGCGC CGGCAGCTAC
GAGTTCGGTG CCGGCATCAG CCCGCAATCG TTGCTGCGCA AGATCGTCAA TGGCGACGAG
ACACTGGCCA CGCTGCGCCT GCTCGAGGGC TGGACTTTCC GCCAGGTGCG CGCCGAACTG
GCCCGCAACC CCGACCTGCG CCCCGACAGC GCCGGCATGG ACGAGGCCCA GCTGATGGCC
GCATTGGGCA CACCCGGGCT CCCCGCCGAG GGCCGCTTCT TCCCCGACAC CTACGCGTTC
TCGAAAGGCA CCAGCGATCT GCACGTGCTG CGCCGGGCGC AGCTGGCGAT GCAGCGCCGG
CTCGACGCCG CCTGGGCGCA GCGCAGCGCC GACCTGCCGC TCAAGGACGC GACGCAGGCG
CTGATCCTCG CGTCGATCGT CGAGAAGGAA ACCGGTCAGG CCGCCGACCG TGGCCAGATC
GCCGGCGTGT TCATCAACCG CCTGCGCATC GGCATGCCGC TGCAGACCGA TCCGACGGTG
ATCTACGGCC TGGGCGAGGC CTTCGACGGC AACCTGCGCC GCCGCGACCT GCAGGCCGAC
ACGCCCTTCA ACACCTACAC CCGCGGCGGC CTGCCGCCCA CGCCGATCGC GATGCCCGGC
CGCGATGCGT TGCTCGCCGC CACCCGGCCG GCCGGCACGC GGGCGCTCTA CTTCGTCGCT
CGCGGCGACG GCAGCAGCGA GTTCAGCGCC ACCCTGGCCG ACCATAATCG GGCGGTCGAC
CGCTACCAGC GCAAGGCCAG GCCCTGA
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| Protein sequence | MVGLVLLVLL LVAGAAAALH WLNRPLALRQ DPIELQIEPG DSPRDIAAHL VEAGVQTDAW
LLYQWFRWSG DARRIRAGSY EFGAGISPQS LLRKIVNGDE TLATLRLLEG WTFRQVRAEL
ARNPDLRPDS AGMDEAQLMA ALGTPGLPAE GRFFPDTYAF SKGTSDLHVL RRAQLAMQRR
LDAAWAQRSA DLPLKDATQA LILASIVEKE TGQAADRGQI AGVFINRLRI GMPLQTDPTV
IYGLGEAFDG NLRRRDLQAD TPFNTYTRGG LPPTPIAMPG RDALLAATRP AGTRALYFVA
RGDGSSEFSA TLADHNRAVD RYQRKARP
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