Gene Lcho_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1846 
Symbol 
ID6161800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1996897 
End bp1997424 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content56% 
IMG OID641664608 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001790878 
Protein GI171058529 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CCATTCGCCC TGAGGCACCG TCAGACGAAG ACTCGATCGA GCAAGTCACA 
CGGCGAGCCT TTCTCACTCA TCCTTACAGC CATCAAACCG AGCAGTTCAT CATCCGTGCC
CTGCGGGCCG ATCATGCACT TTCAGTTTCG CTCGTTGCCG AAGATGCCGG TCGCATCGTT
GGACATGTTG CGATCTCTCC GGTCTCTGTT GATGACGGTT CGGGTGGCTG GTATGGTCTT
GGCCCCATTT CGGTAGAGCC CAATTTGCAG CGCCGTGGTA TTGGGCGATC CCTGATGGAG
AAGGGCCTTG CGGAACTTCG AAAGTTCGGA GCAAATGGCT GTGTTCTCGT CGGCGATCCG
GCGTTCTACA GTCGGTTCGG GTTTGCGAAC GATCCTGCGC TTGTGCTTGA GGGCATCCCG
AAAGAGTTTT TCCTCTCGCT TTCGTTTGGC ACCTCTTCGG CTCACGGCAA TGTTCAATTC
CATTCGGCAT TTCGAGCCGA AGGTTCTCAG GATGCCTCCT CCGTGTAA
 
Protein sequence
MTITIRPEAP SDEDSIEQVT RRAFLTHPYS HQTEQFIIRA LRADHALSVS LVAEDAGRIV 
GHVAISPVSV DDGSGGWYGL GPISVEPNLQ RRGIGRSLME KGLAELRKFG ANGCVLVGDP
AFYSRFGFAN DPALVLEGIP KEFFLSLSFG TSSAHGNVQF HSAFRAEGSQ DASSV