| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1842 |
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| Symbol | |
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| ID | 6160610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1990798 |
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| End bp | 1992309 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664604 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790874 |
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| Protein GI | 171058525 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0397] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCC TGCCCCTGCC GCCCCCGACC GGTTTCGACC CCGCCCAGCT GCGCTGGATC
AACCGTTATG CCGAACTGGG CCCCGCCTTC GGCCGGCGCC AGGGTGGCCT GGCACTGCCC
GATGCGCGCT GGGTGGCGGT CAGCGAGGGC GCCGCGGCCG AGCTCGGCTG GGCCGGCGAC
TGGTGGCTGC ACCCGCAGGC GCTCGCCGCC CACAGCGCCG GCCCGAGCTG GCCGGGATCG
ACGCCGATGG CCACCGTCTA CAGCGGCCAC CAGTTCGGCA GCTGGGCCGG CCAGCTCGGC
GACGGCCGAG CGCTGCTGCT CGGCGAGATC GACACCCCGA GCGGCCCGCG CGAGATCCAG
CTCAAGGGCA GCGGGCTGAC GCCGTACTCG CGCATGGGCG ACGGCCGCGC GGTGCTGCGT
TCGTCGATCC GCGAGTTCCT GTGTTCGGAG GCGATGGCCG GGCTCGGCAT CCCGACCACG
CGGGCGCTGG CGATCACGGC CTCGCCGCTG CAGGTGCGGC GCGAGGGGCC GGAGACGACC
TCGGTGGTGA CGCGCACGGC GCCGAGCTTC ATCCGCTTCG GCCACTTCGA ACACTTCTGC
CACCACGGCC AGCCGGCGGC GCTGCGCCAG CTGTTCGACT TCGTGCTCGA ACACCACTAC
CCCGAGTGCC GCGACGCGCC CCACCCCGCC GCCGCGCTGC TCGAAAGCGT CAGCCGGCGC
ACCGCCGAGC TGATGGCGCA GTGGCAGGCG GTGGGTTTCT GCCACGGGGT GATGAACACC
GACAACATGT CGATCCTCGG CCTGACGATC GACTACGGGC CGTTCGGTTT CCTCGACGGC
TTCGATCCCG GCCACATCTG CAACCACTCC GACCACCAGG GCCGCTACGC CTACGCGCGC
CAGCCGCAGG TGGCGTACTG GAACCTGCAC GCGCTGGCGC AGGCGCTGGT GCCGCTGGTC
GAGGGCAGCG ACGAAGAGAT CAGCGAGATC CTCGGCGCCG CGCTCGAACC GTATCGCGAG
CTGTTCCCGC ATCAGATGGA CGCACTGATG GGCGCCAAGC TCGGCCTGCA GAGCCGGCGC
GACGAAGACC GCGCGCTGCT CGACGACCTG CTCGGCCTGA TGTCGGCCAC CCAGGTCGAC
TACACGCTGT GCTGGCGCCA GCTGGCGGAT TTCAGCAGCG CCGACGACGG TGGCACGGGG
CCGGTGCGCG ATCTGTTCCT GAACCGCCCG GCCTTCGACG CCTGGGCCGC GCGCTACCGC
AGTCGTCTGC AGGCCGAAGG CAGCGTCGAC GCCGAACGGC GCGCGCGCAT GAACCACGTC
AACCCGCGTT ACGTGCTGCG CAACCACCTG GCCGAGCTGG CGATCCGGCG CTCGCAAGCA
GGCGACGACA GCGAGGTGCA GCGCCTGGCC CGGGTGCTGG AGCGGCCGTT CGACGAGCAA
CCCGAACACG CCGCCTACGC TGCCCTTCCG CCCGACTGGG CACAGACCCT GGAGATTTCC
TGCTCATCAT GA
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| Protein sequence | MSALPLPPPT GFDPAQLRWI NRYAELGPAF GRRQGGLALP DARWVAVSEG AAAELGWAGD
WWLHPQALAA HSAGPSWPGS TPMATVYSGH QFGSWAGQLG DGRALLLGEI DTPSGPREIQ
LKGSGLTPYS RMGDGRAVLR SSIREFLCSE AMAGLGIPTT RALAITASPL QVRREGPETT
SVVTRTAPSF IRFGHFEHFC HHGQPAALRQ LFDFVLEHHY PECRDAPHPA AALLESVSRR
TAELMAQWQA VGFCHGVMNT DNMSILGLTI DYGPFGFLDG FDPGHICNHS DHQGRYAYAR
QPQVAYWNLH ALAQALVPLV EGSDEEISEI LGAALEPYRE LFPHQMDALM GAKLGLQSRR
DEDRALLDDL LGLMSATQVD YTLCWRQLAD FSSADDGGTG PVRDLFLNRP AFDAWAARYR
SRLQAEGSVD AERRARMNHV NPRYVLRNHL AELAIRRSQA GDDSEVQRLA RVLERPFDEQ
PEHAAYAALP PDWAQTLEIS CSS
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