| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1837 |
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| Symbol | |
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| ID | 6160605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1987536 |
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| End bp | 1988312 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664599 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790869 |
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| Protein GI | 171058520 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3503] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGA TTCGGCTGCG CTATCGTTCC GGCATGAATC GAGCGCCCGA ACCTTCAGCC
GCCACCGTGC ACCGGCTCGA CCGCCTCGAT GCGCTGCGTG GCGTGGCGAT GCTGTGGATG
ACGGTCTTCC ACGCCGTCTT CGATCTCAAC CACTTCGGCC TGATCGGGCG CCAGAACTTC
TACATCGACC CGTTCTGGAC CGTGCAGCGG CTGTGCATCG TCTCGCTCTT CCTGCTGTGC
GCCGGCTGCG CACAGGCGGT GGCACACACG CAGGATGTCA CCTGGCCGCG CTTCTGGCGG
CGCTGGTCGC GGGTGGCGGG CTGCGCCGCG CTGGTCAGCC TGTCGTCGTG GTGGATGTTC
CCGAACAGCT GGATCAGCTT CGGCGTGCTG CACGCGCTGG CGTTGATGGT GCTGATGGCG
CGCGGTCTCG CCGGCCGGCC GGCCTGGCTG CTGTGGGCGC TGGCGCTGCT GTGCCTGGCC
TTGCCGCAGC TCTGGAGCCA CGCGTGGTTC GACAGCCGAT GGACCAACTG GATCGGCCTG
GTCACGCACA AGCCGCGCAC CGAGGACTAC GTGCCGCTGC TGCCGTGGTT CGGCGTGCTG
TGCATCGGGC TGGCCGGCGG GCGCTGGCTG CTGGCGCAGC GGCCTGGCTG GTTGCGCGGT
GATCTGCCGG CGGTTCTGCG GCCGGTGGCG GTGCTGGGGC GCTGGTCGCT GAGTTACTAC
ATGCTGCACC AGCCGGTGCT GATCGGCCTG TGCATGGCGT GGCTGATGTG GCGGTGA
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| Protein sequence | MAPIRLRYRS GMNRAPEPSA ATVHRLDRLD ALRGVAMLWM TVFHAVFDLN HFGLIGRQNF
YIDPFWTVQR LCIVSLFLLC AGCAQAVAHT QDVTWPRFWR RWSRVAGCAA LVSLSSWWMF
PNSWISFGVL HALALMVLMA RGLAGRPAWL LWALALLCLA LPQLWSHAWF DSRWTNWIGL
VTHKPRTEDY VPLLPWFGVL CIGLAGGRWL LAQRPGWLRG DLPAVLRPVA VLGRWSLSYY
MLHQPVLIGL CMAWLMWR
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