| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1809 |
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| Symbol | |
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| ID | 6162461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1955046 |
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| End bp | 1955915 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664571 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001790841 |
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| Protein GI | 171058492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000151059 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCAA TCCGCATGAA ACCCCCCGCC GCGAGCCGCA CACGGCTGAC CGGCCTCGGC
GCACGCCTGA CCGCCACCGC GTGCTGCGTT GCCGCGCTGG CCGTGCTTGT CGGCTGCGAA
TCCACCACCA CCCGCGGCGC GGTGGGCGGT GACCGCAAGC AACTGCTGCT GGTGTCGTCC
GCCGAGCTCG AACAGGTGGC GGCGCAGGGC TACCTCAAGC TCAAGACCGA GGCCACCACC
GCCGGCACGC TGAACCAGGA TCCGGCCCTG CTCAGGCGCG TGACCACGAT CGCCAACCGC
CTGACGCCGC ACACCGGCGT GTTCCGCGCC GACGCACCGG GCTGGAAGTG GGAGACCAAC
GTCATCACCA GCGACCAGGT CAACGCCTTC TGCATGCCCG GCGGCAAGAT CATGGTCTAC
ACCGGCCTGG CCCAGCAGCT CAAGCTGACC GACGACGAAC TGGCCGTCGT GATGGGCCAC
GAGATGGCCC ACGCGCTGCG CGAACATTCG CGCGAGCAGG TGTCGCAGGC GATGGCCGCA
CAGACCGCCA TCGGCGTGGG CAGCGCGGTG CTCGGCCTGG GCCAGGCCTC GACCGAGATC
GCCGGCACCG TCTACGAATC CCTGATCGCC ACCCGCTTCA GCCGCAACGA CGAGACCGAA
TCCGACCGCA TCGGCCTCGA ACTCATGGCG CGCGCCGGTT ACGACCCGCG CGCCGGGGTC
AGCCTGTGGC AGAAGATGGG CGGCGCCAAG AGCGGCTCGG CGCCGCCCGA GTTCCTGAGC
AGCCACCCGG CCGACGACCG GCGGGTGCAG ACGATCCAGG GCCTGCTGCC GACCGTGATG
CCGCTGTATC AGGCGGCGAC GAAACGATGA
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| Protein sequence | MSAIRMKPPA ASRTRLTGLG ARLTATACCV AALAVLVGCE STTTRGAVGG DRKQLLLVSS
AELEQVAAQG YLKLKTEATT AGTLNQDPAL LRRVTTIANR LTPHTGVFRA DAPGWKWETN
VITSDQVNAF CMPGGKIMVY TGLAQQLKLT DDELAVVMGH EMAHALREHS REQVSQAMAA
QTAIGVGSAV LGLGQASTEI AGTVYESLIA TRFSRNDETE SDRIGLELMA RAGYDPRAGV
SLWQKMGGAK SGSAPPEFLS SHPADDRRVQ TIQGLLPTVM PLYQAATKR
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