| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1794 |
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| Symbol | |
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| ID | 6163293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1937757 |
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| End bp | 1938773 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664556 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001790826 |
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| Protein GI | 171058477 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000588252 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAAC AACCGAAGCA GACCGGTCGT GCCCCGGCCC TGCGGCCCGC ACGCCGGGCT
GTCGCCTGCC TGCTGGCCGC GCTGGGCGCC GCCGCGCCGA CGCTGGCGCA GGCCCAGGTC
GCCTTCATCT CCAGCGAGAA GGACAACGCG CTGACGGTGC TCGACCTCAA GACCCAGGCC
GTGATCGGCA CGGTCGCCAC CTGCAAGCGC CCGCGCCACA TGCAGCTCAC GCCCGACGGC
AAGCAGCTGA TGGTGGCCTG CGGTGACTCG GCCCAGGCCG ACGTGATCGA CGTGGCCACC
CGCAAGTCGG TCGGCAAGGT GGGCCTGGGC GAAGACCCCG AGATCTTCGA CCTGTCGCCC
GACGGCAAGA CCCTCTACGT CAGCAACGAG GAAGACGGCG AACTCGGCGT GGTCGACCTC
GCCAGCGGCA AGCGCAGCAA GAGCATCGAG GTCGGCAAGG AGCCCGAGGG TGTCAAGGTC
AGCCCCGACG GCAAGACCGT CTACGTGACC TCCGAGGTGG CCAGCCTGGT GCACGTGATC
GACGTGGCCA GCGGCAAGGT CACCAAGAAC ATCAAGGCCG GCAAGCGCCC GCGGCGTTTT
GCCATGACAC CCGACGGCTC GCAGCTGTGG GTCACCAACG AGCTGGCCGC CAGCGTGACG
GTGATCAGCA CCCGCGATCA CACGGTGCTC GACACCATCA AGTTCGAGGT CAAGGGTGCG
CGCGCCACCG ACATCACGCC GGTGGGCATC ACGATCAGTG CCGACGGCCA GCGCGCCTAC
GTCGGCCTGG GCAAGGCCAA CCATGTCGCG TTCGTCGACG TCGCCACGCG CAAGACCACC
GACCTGGTGC TGGTCGGCAA ACGCGCCTGG GGCGTGGGGC TGAACAAGGC GCAGGACCGG
CTCTATGTCG TCAACGGTCT GTCCGACGAC CTGACCATCG TCGACACCGG CAGCGCCAAG
GCGATCAAGA GCGTGGCCGT GGGCCGCGTG CCGCACAGCG TGGTGGTGGT CGAGTGA
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| Protein sequence | MTQQPKQTGR APALRPARRA VACLLAALGA AAPTLAQAQV AFISSEKDNA LTVLDLKTQA
VIGTVATCKR PRHMQLTPDG KQLMVACGDS AQADVIDVAT RKSVGKVGLG EDPEIFDLSP
DGKTLYVSNE EDGELGVVDL ASGKRSKSIE VGKEPEGVKV SPDGKTVYVT SEVASLVHVI
DVASGKVTKN IKAGKRPRRF AMTPDGSQLW VTNELAASVT VISTRDHTVL DTIKFEVKGA
RATDITPVGI TISADGQRAY VGLGKANHVA FVDVATRKTT DLVLVGKRAW GVGLNKAQDR
LYVVNGLSDD LTIVDTGSAK AIKSVAVGRV PHSVVVVE
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