Gene Lcho_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1773 
Symbol 
ID6162927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1907433 
End bp1909514 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content70% 
IMG OID641664535 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001790805 
Protein GI171058456 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000805587 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCCGAT CCGACCGTTC CGACCGCACA CGGCGCCCCC GCCGCGTGCC GCAAAACCCC 
GGCGCCCTGA TCGGCCCCCG GCTTGCCGCA ACGCTGCGGC AGGCCGGCAC GCTGGCGCTC
GCGCTGCTGT GCATGACGGC CATCGGCCTG GCCACCGGCG GCGCAGCGAA TGCCGCCGAA
CCGGTCAAGA CGCGGCTCAA GCGTGCGCTG CCCGACGAAT CGCCCACCGA AGCGCGCGTG
ATCGTGAAGT ACCGCGCCGC CGCCGATGAC GGCAGCAGCG CCCGCATCGC CGCCGCGCCG
GGCAAGGCCA CAGCCGCAGT CCGCCGGGCG CAGGCGATGG GCCAGCGCCA CGGCCTGGCG
CTGGCCGACG GCAACACCCT CGCGCCGCGC ACCCAGGTGC TCAAGGCCAG CGGCCTGAGC
AGCGCTGCGC TGGCCGCCCG GCTGGCGACC GATCCGGACG TCGAATACGT CGAGATCGAT
CGCCGCATGC GCGCGCACGC CGCACCGAAC GACCCGCTGT ACACCGCCAG CCCGGCCAAC
AGTCCGGCCG CGGGGCAGTG GTATCTGCGC GCATCGACGG CCGATCTGGT GGCGTCGATC
GATGTCGAAG GGGCGTGGGG CATCACCAAC GGCAGCGCCG ACATCGTCGT GGCCGTGCTC
GACACGGGCG TACGCCCCGA ACACCCGGAT CTGGTCGGCA AGCTCCTGCC AGGCTACGAC
TTCATCTCGG ACGCCAACAT TGCCAATGAC GGCAACGGTC GCGACGGCGA TCCGACCGAT
CCGGGCGACT GGGTCGCCAC GTCGGACATC GGCTCGCTCG TCGCCAGCAC CTGCGTCGAA
GAAGACAGCA GCTGGCACGG CACGCAGATG GCCGGGCTGG TGGGCGCGGC GACCCACAAC
GGTTCGGGCA TGGCCGGCGT CGGGCGCCAC GTCATGGTGC TGCCCGTGCG GGTGCTCGGC
AAGTGCGGCG GCTTTGTGTC GGACATCGTC GCCGGCATGC GCTGGGCTGC CGGCGTGAGC
GTCCCCGGCG TCCCTGCGAA CCCCCATCCG GCGCGGGTGC TCAACATGAG CCTGGGTGGC
GAAGGCGCCT GCAGTGCGAC CTACCAGAGC GCTGTCGACG ATGTCATCGC AGCCCGCGCC
GTGGTGGTGT CATCGGGCGG CAACGAAGGC CTGGCGGTCG ACATGCCGGC CAACTGCGTC
GGCGTGATCG CGGTGGGCGG CGTGCGTCAC AGCGGCACCA AGAACGGCTT CTCCAGCCTC
GGGCCCGAGA TCGCGATCAG CGCGCCGGGT GGCAACTGCG TCAACACGGA TGGGCAGGCC
TGCCTCTATC CGATCCTGAG CACGTCCAAC ACCGGCACCA CCGCGCCGGG CACGGCGACA
TTCACCGACG GTCAGATCAG GCCGGCCTTC GGCACGAGTT ACGCGTCACC GCTGGTCGCA
GGCACTGCGG CCTTGATGCT GGCTGTCCAA CCGACGTTGA GCCCAGCCCA GATCCGTCAG
ATGTTGCGTG CCTCCGCACG TGCATTCCCG CCCCTGTCCA CCGACACGGC ACTGCCCGAG
TGCGTCGCGC CGACTGCGGC CGAACAGACC GAATGCCACT GCACCACCAG CACCTGCGGG
GCAGGCATGC TGGACGCTGG CGCAGCCGTG CTGCTTGCGG CCGCAAACAT GACGGTGGCA
CATGTGCATG CAACGAGCAC CCAGGTCAAT GTCGGCGACA CCGTCGTGCT GGACGCATCA
GCGTCTCGTG CGTCCGATGG TTCGCCCCTC ACCGCCTATC TGTGGGAGAT CATGCAAGGC
ACCGGTGCCA CGTTCGCCAA CGGCAACGCC ACCGCCGTCG TCACGCTCGA CACCACCGTC
CAGACCGAAC TGCTCGTGCG TCTGACCGTG ACCGACGGCC GTGGCGGCAC GGCCCGAAGC
AGCGTCGTCA TCCGGGTCGG GGCACCACCC GACGACGTCA CGACAGACCC CCCCTCCAGC
AGCGGGGGCG GCGCACTCGG GCTCGAATGG CTGGCAGCGT TGACCGCCGC GATCGCGGCA
CTCGGCTGGA TGCGACGCAG ACAGGTCGGT GCCGACGATT GA
 
Protein sequence
MLRSDRSDRT RRPRRVPQNP GALIGPRLAA TLRQAGTLAL ALLCMTAIGL ATGGAANAAE 
PVKTRLKRAL PDESPTEARV IVKYRAAADD GSSARIAAAP GKATAAVRRA QAMGQRHGLA
LADGNTLAPR TQVLKASGLS SAALAARLAT DPDVEYVEID RRMRAHAAPN DPLYTASPAN
SPAAGQWYLR ASTADLVASI DVEGAWGITN GSADIVVAVL DTGVRPEHPD LVGKLLPGYD
FISDANIAND GNGRDGDPTD PGDWVATSDI GSLVASTCVE EDSSWHGTQM AGLVGAATHN
GSGMAGVGRH VMVLPVRVLG KCGGFVSDIV AGMRWAAGVS VPGVPANPHP ARVLNMSLGG
EGACSATYQS AVDDVIAARA VVVSSGGNEG LAVDMPANCV GVIAVGGVRH SGTKNGFSSL
GPEIAISAPG GNCVNTDGQA CLYPILSTSN TGTTAPGTAT FTDGQIRPAF GTSYASPLVA
GTAALMLAVQ PTLSPAQIRQ MLRASARAFP PLSTDTALPE CVAPTAAEQT ECHCTTSTCG
AGMLDAGAAV LLAAANMTVA HVHATSTQVN VGDTVVLDAS ASRASDGSPL TAYLWEIMQG
TGATFANGNA TAVVTLDTTV QTELLVRLTV TDGRGGTARS SVVIRVGAPP DDVTTDPPSS
SGGGALGLEW LAALTAAIAA LGWMRRRQVG ADD