Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1773 |
Symbol | |
ID | 6162927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1907433 |
End bp | 1909514 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664535 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_001790805 |
Protein GI | 171058456 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000805587 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCCGAT CCGACCGTTC CGACCGCACA CGGCGCCCCC GCCGCGTGCC GCAAAACCCC GGCGCCCTGA TCGGCCCCCG GCTTGCCGCA ACGCTGCGGC AGGCCGGCAC GCTGGCGCTC GCGCTGCTGT GCATGACGGC CATCGGCCTG GCCACCGGCG GCGCAGCGAA TGCCGCCGAA CCGGTCAAGA CGCGGCTCAA GCGTGCGCTG CCCGACGAAT CGCCCACCGA AGCGCGCGTG ATCGTGAAGT ACCGCGCCGC CGCCGATGAC GGCAGCAGCG CCCGCATCGC CGCCGCGCCG GGCAAGGCCA CAGCCGCAGT CCGCCGGGCG CAGGCGATGG GCCAGCGCCA CGGCCTGGCG CTGGCCGACG GCAACACCCT CGCGCCGCGC ACCCAGGTGC TCAAGGCCAG CGGCCTGAGC AGCGCTGCGC TGGCCGCCCG GCTGGCGACC GATCCGGACG TCGAATACGT CGAGATCGAT CGCCGCATGC GCGCGCACGC CGCACCGAAC GACCCGCTGT ACACCGCCAG CCCGGCCAAC AGTCCGGCCG CGGGGCAGTG GTATCTGCGC GCATCGACGG CCGATCTGGT GGCGTCGATC GATGTCGAAG GGGCGTGGGG CATCACCAAC GGCAGCGCCG ACATCGTCGT GGCCGTGCTC GACACGGGCG TACGCCCCGA ACACCCGGAT CTGGTCGGCA AGCTCCTGCC AGGCTACGAC TTCATCTCGG ACGCCAACAT TGCCAATGAC GGCAACGGTC GCGACGGCGA TCCGACCGAT CCGGGCGACT GGGTCGCCAC GTCGGACATC GGCTCGCTCG TCGCCAGCAC CTGCGTCGAA GAAGACAGCA GCTGGCACGG CACGCAGATG GCCGGGCTGG TGGGCGCGGC GACCCACAAC GGTTCGGGCA TGGCCGGCGT CGGGCGCCAC GTCATGGTGC TGCCCGTGCG GGTGCTCGGC AAGTGCGGCG GCTTTGTGTC GGACATCGTC GCCGGCATGC GCTGGGCTGC CGGCGTGAGC GTCCCCGGCG TCCCTGCGAA CCCCCATCCG GCGCGGGTGC TCAACATGAG CCTGGGTGGC GAAGGCGCCT GCAGTGCGAC CTACCAGAGC GCTGTCGACG ATGTCATCGC AGCCCGCGCC GTGGTGGTGT CATCGGGCGG CAACGAAGGC CTGGCGGTCG ACATGCCGGC CAACTGCGTC GGCGTGATCG CGGTGGGCGG CGTGCGTCAC AGCGGCACCA AGAACGGCTT CTCCAGCCTC GGGCCCGAGA TCGCGATCAG CGCGCCGGGT GGCAACTGCG TCAACACGGA TGGGCAGGCC TGCCTCTATC CGATCCTGAG CACGTCCAAC ACCGGCACCA CCGCGCCGGG CACGGCGACA TTCACCGACG GTCAGATCAG GCCGGCCTTC GGCACGAGTT ACGCGTCACC GCTGGTCGCA GGCACTGCGG CCTTGATGCT GGCTGTCCAA CCGACGTTGA GCCCAGCCCA GATCCGTCAG ATGTTGCGTG CCTCCGCACG TGCATTCCCG CCCCTGTCCA CCGACACGGC ACTGCCCGAG TGCGTCGCGC CGACTGCGGC CGAACAGACC GAATGCCACT GCACCACCAG CACCTGCGGG GCAGGCATGC TGGACGCTGG CGCAGCCGTG CTGCTTGCGG CCGCAAACAT GACGGTGGCA CATGTGCATG CAACGAGCAC CCAGGTCAAT GTCGGCGACA CCGTCGTGCT GGACGCATCA GCGTCTCGTG CGTCCGATGG TTCGCCCCTC ACCGCCTATC TGTGGGAGAT CATGCAAGGC ACCGGTGCCA CGTTCGCCAA CGGCAACGCC ACCGCCGTCG TCACGCTCGA CACCACCGTC CAGACCGAAC TGCTCGTGCG TCTGACCGTG ACCGACGGCC GTGGCGGCAC GGCCCGAAGC AGCGTCGTCA TCCGGGTCGG GGCACCACCC GACGACGTCA CGACAGACCC CCCCTCCAGC AGCGGGGGCG GCGCACTCGG GCTCGAATGG CTGGCAGCGT TGACCGCCGC GATCGCGGCA CTCGGCTGGA TGCGACGCAG ACAGGTCGGT GCCGACGATT GA
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Protein sequence | MLRSDRSDRT RRPRRVPQNP GALIGPRLAA TLRQAGTLAL ALLCMTAIGL ATGGAANAAE PVKTRLKRAL PDESPTEARV IVKYRAAADD GSSARIAAAP GKATAAVRRA QAMGQRHGLA LADGNTLAPR TQVLKASGLS SAALAARLAT DPDVEYVEID RRMRAHAAPN DPLYTASPAN SPAAGQWYLR ASTADLVASI DVEGAWGITN GSADIVVAVL DTGVRPEHPD LVGKLLPGYD FISDANIAND GNGRDGDPTD PGDWVATSDI GSLVASTCVE EDSSWHGTQM AGLVGAATHN GSGMAGVGRH VMVLPVRVLG KCGGFVSDIV AGMRWAAGVS VPGVPANPHP ARVLNMSLGG EGACSATYQS AVDDVIAARA VVVSSGGNEG LAVDMPANCV GVIAVGGVRH SGTKNGFSSL GPEIAISAPG GNCVNTDGQA CLYPILSTSN TGTTAPGTAT FTDGQIRPAF GTSYASPLVA GTAALMLAVQ PTLSPAQIRQ MLRASARAFP PLSTDTALPE CVAPTAAEQT ECHCTTSTCG AGMLDAGAAV LLAAANMTVA HVHATSTQVN VGDTVVLDAS ASRASDGSPL TAYLWEIMQG TGATFANGNA TAVVTLDTTV QTELLVRLTV TDGRGGTARS SVVIRVGAPP DDVTTDPPSS SGGGALGLEW LAALTAAIAA LGWMRRRQVG ADD
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