Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1752 |
Symbol | |
ID | 6161291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1872469 |
End bp | 1872954 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641664512 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001790784 |
Protein GI | 171058435 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0206721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC CTCTCCCGGC CATACCGCCC AAGCGTTACT TCACCATCGG TGAAGTGAGC GAGTTGTGTG GCGTCAAGCC GTATGTGCTG CGCTACTGGG AGCAGGAATT CACCCAACTG CGGCCGATGA AACGGCGCGG CAACCGGCGT TATTACCAGC ACCACGAGGT GCTCCTGATC CGCCGTATCC GCGACCTGCT CTACGAGCAG GGTTTCACCA TCAGCGGGGC ACGTAATCGT CTGGCGGAAT TGGGCGCGCT GAATGCGCAC TCGTCGCACC TCGACGACTT CGAGGACGAA GTCTCCGAGC GCGAACTGGG CTTGTCGCCC GAACGCGTTC CGGCCCCGCC CGTACCGACC CCAGCGAGTG CGGCGCTCGT GATCAAGCCT GCCGATGCGT CGACTGCGGT CGCTCCTGCT GGCCGGGTGC AGTCCATACG CGATGAACTC TTGTCGATCC GAAGTCTGCT TGAGGTCGAT TTCTAA
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Protein sequence | MENPLPAIPP KRYFTIGEVS ELCGVKPYVL RYWEQEFTQL RPMKRRGNRR YYQHHEVLLI RRIRDLLYEQ GFTISGARNR LAELGALNAH SSHLDDFEDE VSERELGLSP ERVPAPPVPT PASAALVIKP ADASTAVAPA GRVQSIRDEL LSIRSLLEVD F
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