| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1748 |
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| Symbol | rplT |
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| ID | 6161340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1868030 |
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| End bp | 1868386 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641664508 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001790780 |
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| Protein GI | 171058431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0111676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCG TCAAACGTGG TGTTACCGCC CGTGCTCGTC ATAAGAAGGT CCTGGCACTG
GCCAAGGGTT TCCGCGGTCG CCGCAAGAAC GTCTATCGCA TCGCCAAACA GGCGGTGATG
AAGGCGGGTC AATACGCCTA CCGTGACCGC CGTGCCAAGA AGCGCGTGTT CCGCCGCCTG
TGGATCGCGC GTATCAACGC AGCCAGCCGT TCGCTCGGCC TGACCTACAG CAAGTTCATT
GCTGGCTTGA AGAAGGCCCA GATCGACATC GACCGCAAGG TCCTGTCGGA CATGGCCATC
CACGATCCGG CCGCCTTCGG CAGCATCGTC GACAAGGTCA AGGCCCAGCT CGCTTGA
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| Protein sequence | MPRVKRGVTA RARHKKVLAL AKGFRGRRKN VYRIAKQAVM KAGQYAYRDR RAKKRVFRRL
WIARINAASR SLGLTYSKFI AGLKKAQIDI DRKVLSDMAI HDPAAFGSIV DKVKAQLA
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