Gene Lcho_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1737 
Symbol 
ID6161237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1854357 
End bp1855853 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content70% 
IMG OID641664497 
Productaldehyde dehydrogenase 
Protein accessionYP_001790769 
Protein GI171058420 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value8.92172e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGCC CCGACACCGA CTGGCACGCC CGCGCCCTGG CCCTGCGCAT CGACGGCCGC 
GCCGTCATCG ACGGCGAGCG CCGCGACGCG CTGGCGGGCG AGACCTTCGC CTGCCATTCG
CCGATCGACG GCCGCCGGCT GGCCGCGGTG GCGCGCTGCC GCGAGGCCGA TGTCGACCGC
GCGGTGGCCT CGGCCCGCGC CGCCTTCGAC GACGGCCGCT GGGCCCGCAA GGCACCGGCC
GAGCGCAAGA AGATCCTGCA GCGCTTCGGT GAAAAGATCC TCGCCGCGCG CGAGGAACTG
GCGCTGCTCG AGACCCTAGA CATGGGCAAG CCGATCCGCT ACTCGCTCGC CGTCGACGTG
CCGTCGACCG CGCGCACGAT CACCTGGTAC GCCGAGGCGA TCGACAAGGT CTACGACGAG
ATCGCGCCCA CCGGCCGCCA CGCGCTGGCG CTGATCACGC GCGAGCCGAT GGGCGTGATC
GGCGCCATCG TGCCCTGGAA CTACCCGATG ATCATGGCCG CCTGGAAGCT CGGGCCGGCG
CTGGCCACCG GCAACTCGGT GGTGATCAAG CCGAGCGAGA AGTCGCCGCT CACCGCGCTG
CGGCTGGCCG AACTGGCGCT CGATGCCGGC CTGCCGCCGG GCGTCTTCAA CGCCGTGCCG
GGCTACGGCC ACGAGGCCGG CGAGGCGCTG GCGCTGCACA TGGATGTCGA CGCCATCGGC
TTCACCGGCT CGACCCGGGT GGGCCGCAAG ATGCTCGAGT ACGCCGGCCG CTCCAACCTC
AAGCGCGTGT TCAACGAGCT GGGCGGCAAG TCGGCGTTCA TCGTCTTCCC CGACCACCAG
GATCCGGCGC TGGCCGCCTG CACCGTCGCG GCCAGCCTGT ACTTCAACCA GGGCGAGTCG
TGCAATGCAC CGTCGCGGGT GCTGGTGCAT GAATCCATCG CCGACGACTT CGTCGCCGCG
GTGCGTGCCG AGATGCCGAA GTACGCGCCG GCCGATCCGC TCGACGCTGG CAGCGTGATG
GGCGCGCTGG TCGACGAGGG CCAGATGAAC ACGGTGCTCG GCTTCATCGC CTCGGCCGAG
ACCGAAGGCG CGGTGTGTGC AGCCGGTGGC CGCCAGGTGC GCGCCGAGAC CGGCGGCTAC
TACGTCGAGC CGACCTTGTT CGACCAGGTG AGCCCGCAGA TGCGCATCGC CCGCGAGGAG
ATCTTCGGCC CGGTGCTGTC GGTGCTGCGC TTCTCGACCG AGGCCGAGGC CGTGGCACTC
GCCAATGCCA GCCCCTACGG TCTGCAGGCC AGCGTCTGGA GCCACGACAT CAACCGTGCC
CATCGCGTGG CACGCGCCTT GCGAGCCGGC ACGGTCCATG TCAACCAGTA CGACGAGGAC
GACATCACCG TGCCGTTCGG CGGCTACAAG CAAAGTGGCA ACGGCCGCGA CAAGTCGCTG
CACGCGCTCG ACAAGTACAC CGAACTCAAG ACCACCTGGC TGCGCATCGA CGACTGA
 
Protein sequence
MNSPDTDWHA RALALRIDGR AVIDGERRDA LAGETFACHS PIDGRRLAAV ARCREADVDR 
AVASARAAFD DGRWARKAPA ERKKILQRFG EKILAAREEL ALLETLDMGK PIRYSLAVDV
PSTARTITWY AEAIDKVYDE IAPTGRHALA LITREPMGVI GAIVPWNYPM IMAAWKLGPA
LATGNSVVIK PSEKSPLTAL RLAELALDAG LPPGVFNAVP GYGHEAGEAL ALHMDVDAIG
FTGSTRVGRK MLEYAGRSNL KRVFNELGGK SAFIVFPDHQ DPALAACTVA ASLYFNQGES
CNAPSRVLVH ESIADDFVAA VRAEMPKYAP ADPLDAGSVM GALVDEGQMN TVLGFIASAE
TEGAVCAAGG RQVRAETGGY YVEPTLFDQV SPQMRIAREE IFGPVLSVLR FSTEAEAVAL
ANASPYGLQA SVWSHDINRA HRVARALRAG TVHVNQYDED DITVPFGGYK QSGNGRDKSL
HALDKYTELK TTWLRIDD