| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1713 |
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| Symbol | |
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| ID | 6162238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1830641 |
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| End bp | 1831711 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664473 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790745 |
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| Protein GI | 171058396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000187754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGCCGC GTCCGCACGC CCTGCGCATC GGCCTGTTCG CGATCGGCGG CCTGGCGCTG
CTGGTGATGG CCGTCGCCAG CGTCTTCGGC GGCCGGCTGT TCGCCGACTC GGAACGCGCG
GTGCTGCATT TCAACGGCTC GATCTACGGC CTGCAGATCG GCGCGCCGGT GGTGTTCCGC
GGCGTGCGCA TGGGTGGCGT GGTGTCGATC GGGCTGGTCA ACGATGCGCA GGGCGCGGGT
TTCCAGATCC CGGTGGTGGT CGAGCTCGAC AGCGAGCTGC TGCGCAGCCT GCAAGGCCGG
CCGGCCGGCG CGGCATCGGC CGCCGATGCC GATGCCGCCG TGCTGCCTGC GCTGGTGGCG
CGTGGCCTGA GCGGCCAGCT CGCCATGCAG AGCCTGCTCA CCGGCCTGCT GTACGTCGAC
CTCGACCTGC GCCCGGACGG CTCGACCGCA CGTTACGGCC GGGTGCCCGA CGGCATGGTC
GAGATCCCGA CCACTGCCAC CCGCCTGCAG ACGCTGCAGG CCCAGCTCGA AGGCCTCGAC
TTCGGCCAGC TCGCCAAGGA CCTCTCTGCC ATCGCCGCCA CCACGCGCGG TTTCGTCGCC
AGCCCCGAGC TGCGCCAGTC GCTCGACGAT CTGGCGCAGA CCAGCGGCTC GCTGCGACGC
CTGAGCGCGA CGCTCGAACG CCGCGCCGGC CCGCTGGCCG ACGGCGTCGG GCGCGCCCTG
GCGCAGACCG GCCAGGCCGC CGATCAGGTC GGTGCTGCCG CCAGCCGGGC CGGCACGGCG
GTCGGGCAGA TCGGTGCCGC GGCCGAGCAG ATCGGCGCCA CCACGCGCCG CGCCGACGCC
GTGATCGCGC AAGGCCCGCC GCTCATGCGC AGCCTGCAGC AGGCCGCCGA CGAGCTGTCG
CGCACCGCAG TGGCGCTGCG CCAGGCCACC AGCGCCGACG CCGGCGTGGT GCAGAACGCC
GACCGCGCGT TGGCCGACGT GGCGCGTGCC GCCCGCGCCG TGCGTGAACT CGCCGAGCTG
CTGGAACAGC AGCCCGAGTC GCTGATCCGC GGCCGGCGCG ATCCGCCTTG A
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| Protein sequence | MTPRPHALRI GLFAIGGLAL LVMAVASVFG GRLFADSERA VLHFNGSIYG LQIGAPVVFR
GVRMGGVVSI GLVNDAQGAG FQIPVVVELD SELLRSLQGR PAGAASAADA DAAVLPALVA
RGLSGQLAMQ SLLTGLLYVD LDLRPDGSTA RYGRVPDGMV EIPTTATRLQ TLQAQLEGLD
FGQLAKDLSA IAATTRGFVA SPELRQSLDD LAQTSGSLRR LSATLERRAG PLADGVGRAL
AQTGQAADQV GAAASRAGTA VGQIGAAAEQ IGATTRRADA VIAQGPPLMR SLQQAADELS
RTAVALRQAT SADAGVVQNA DRALADVARA ARAVRELAEL LEQQPESLIR GRRDPP
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