| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1688 |
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| Symbol | |
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| ID | 6162483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1800338 |
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| End bp | 1801855 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664443 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001790720 |
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| Protein GI | 171058371 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TCGTCGGGGT GACTTCCAAG TCGCCCGTCA ACCAGTTGAT TTATGACGCG
CTCTTGCTGC TGCAGCATCG TGGGCAGGAT GCCGCCGGCA TCGTGACCGC AGTGGGCACC
AAGTTCTTCA TGCACAAGGC GCGGGGGATG GTGCGCGACG TGTTCCGCAC CCGCAACATG
CGGGCACTGC CCGGCACGAT CGGCCTCGGC CAGGTGCGCT ACCCGACCGC CGGCAACGCC
TACAGCGAGG AGGAGGCCCA GCCCTTCTAC GTCAATGCGC CGTTCGGCCT GGTGCTGGTG
CACAACGGCA ACATCACCAA TGCCCACGCG CTGAAGAAGG AGCTGTTCGG CATCGACCGA
CGCCACCTCA ACACCGAGAG CGACACCGAG GTGCTGATCA ACATCCTGGC GCACGAGCTC
GAGCTGGCGG CGCGTGATCT GCCGCTGACC GCCGTCGAGG TGTTCAAGGC GATCAGCGCG
GTGCACCGCC GCGTCAAGGG CTCGTATGCG GTGGTCGCGA TGATCGCCGG CTACGGGCTG
GTGGCGTTTC GCGATCCCTA CGGCATCCGC CCCCTGTGCA TCGGCTCGAT GCCCGGCGCC
GACGGCACCG AATGGATGAT CGCCAGCGAA TCGGTCGCCC TCGAAGGCAC CGGCCATCAT
TTCGAGCGCG ACATCGCGCC GGGCGAGGCG GTCTTCATCG ACATGGACGG CCAGTTGCAC
GCGCAGCAAT GCGCGGTGGC GCCGTCGCTC AATCCGTGCG TGTTCGAGTT CGTCTACCTG
GCGCGGCCCG ATTCGGTGAT CGACGGCATT TCGGTCTATC ACGCGCGCCT CAACATGGGC
GAGACCCTGG CGCAGCGCGT CATCAACACG CTGCCGCCCA ACGAGATCGA CGTGGTGATC
CCGATCCCCG AGTCGAGCCG GCCGTCGGCG ATGCAGCTGG CGCAGAAGCT GGGCAAGCCC
TACCGCGAGG GTTTCGTCAA GAACCGCTAC GTGGGCCGCA CCTTCATCAT GCCGGGCCAG
TCGGTGCGCA AGAAGAGCGT GCGCCAGAAG CTCAACGCGA TCGGCATGGA GTTCAAGGGC
CGCAACGTGC TGCTGGTCGA CGATTCGATC GTGCGCGGCA CCACCTCGAA AGAGATCGTG
CAGATGGCGC GCGAGGCCGG CGCCAACAAG GTCTACATGG CGTCGGCGGC GCCGCCGGTG
CGGTTTCCGA ACGTCTACGG CATCGACATG CCGACCAACT CGGAGCTGAT CGCGCATGGC
CGCACGACCG AAGAGATCCG TCAGTACATC GGCTGCGACG CGCTGATCTA CCAGGACGTC
GACGCGATGA AGCGCGCCGT GTCGGCGCTG AACCCGGCGC TGGCGGGCTT CGAGGCCTCG
TGTTTCGACG GTCACTACAT CACCGGCGAC GTCACGGCGG CGGATTTCGA CGCCATCCTG
ACCCAGCGCA GTTCGCAGCC GCAGGACGAA GAGACGGCTG ATCGCACCCG TCTGGCGCTG
CAGAACGCAA GCGAGTGA
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| Protein sequence | MCGIVGVTSK SPVNQLIYDA LLLLQHRGQD AAGIVTAVGT KFFMHKARGM VRDVFRTRNM
RALPGTIGLG QVRYPTAGNA YSEEEAQPFY VNAPFGLVLV HNGNITNAHA LKKELFGIDR
RHLNTESDTE VLINILAHEL ELAARDLPLT AVEVFKAISA VHRRVKGSYA VVAMIAGYGL
VAFRDPYGIR PLCIGSMPGA DGTEWMIASE SVALEGTGHH FERDIAPGEA VFIDMDGQLH
AQQCAVAPSL NPCVFEFVYL ARPDSVIDGI SVYHARLNMG ETLAQRVINT LPPNEIDVVI
PIPESSRPSA MQLAQKLGKP YREGFVKNRY VGRTFIMPGQ SVRKKSVRQK LNAIGMEFKG
RNVLLVDDSI VRGTTSKEIV QMAREAGANK VYMASAAPPV RFPNVYGIDM PTNSELIAHG
RTTEEIRQYI GCDALIYQDV DAMKRAVSAL NPALAGFEAS CFDGHYITGD VTAADFDAIL
TQRSSQPQDE ETADRTRLAL QNASE
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