Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1681 |
Symbol | |
ID | 6163948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1793748 |
End bp | 1794410 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641664436 |
Product | phosphoribosylanthranilate isomerase |
Protein accession | YP_001790713 |
Protein GI | 171058364 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTTT CGCCTGCCCG AACACGCATC AAGATCTGCG GCCTGACGCG GCCCGGTGAC GTGGATGTGG CCGTGGCTGC CGGCGCCGAT GCGATCGGTC TGGTCTTCTA TCCACGCAGC CCGCGCCATG TCAGCCTGGC CCTGGCGAGC GATCTGGCTC GGCGCCTGCC ACCCTTCGTG ACCCCGGTCG GATTGTTCGT GAATGCGTCG CCGGAAGACG TCGAACGGGC CTGCGAGCAG ATCCCGAACC TGCTGCTGCA GTTTCACGGT GACGAAACAC CGGCGCAGTG CGAGGCCTCG GGCCGACCGT ATCTGCGTGC TGCGCGCATG GATCCGGGTT TCGACTTGTT AAACTTCGCA CGCTCCTACA CCAGCGCCCA GGCCATCCTG CTCGACGCCC ATGTCGAGGG TTATGGCGGC GGCGGAAAGG TCTTCGATTG GTCGCTCATT CCCTCAGACG TGCCCCGTCC GGTCGTTTTG TCTGGTGGGT TGAATCCTGC AAACGTGACC GATGGAGTGC TTCGCGTCCG GCCGTGGGCC GTTGATGTGA GTTCTGGCGT CGAGTCGGCC AAGGGCATCA AGGATGCCGT GCTGATGCGC CAGTTTTGCG AAGCCGTCCG TGATGCTGAT GCGCGTTCGA TCGACGCCAG CAGCGGATAT TGA
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Protein sequence | MILSPARTRI KICGLTRPGD VDVAVAAGAD AIGLVFYPRS PRHVSLALAS DLARRLPPFV TPVGLFVNAS PEDVERACEQ IPNLLLQFHG DETPAQCEAS GRPYLRAARM DPGFDLLNFA RSYTSAQAIL LDAHVEGYGG GGKVFDWSLI PSDVPRPVVL SGGLNPANVT DGVLRVRPWA VDVSSGVESA KGIKDAVLMR QFCEAVRDAD ARSIDASSGY
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