Gene Lcho_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1672 
Symbol 
ID6163737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1781517 
End bp1782485 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID641664426 
Productacetyl-CoA carboxylase, carboxyl transferase, alpha subunit 
Protein accessionYP_001790704 
Protein GI171058355 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GACATTTCCT CGAATTCGAG CAGCCCATCG CCGAGCTCGA AACCAAGATC 
GAGGAACTGC GCTACGTGCA GAACGAGTCG GCCGTCGACA TCTCGGAAGA GATCGACCGC 
CTGTCCAAGA AGAGCCTGCG ACTGGCGAAG GACATCTATT CGAGCCTGTC GCCCTGGCAG 
GTGACGCAGA TCGCGCGTCA CCCGCAGCGT CCGTACACGC TGGACTACGT CAACGAAGTG 
TTCACTGACT TCGAGGAGCT GCACGGCGAT CGTTCGTTCG CCGATGACCT GTCGATCGTC 
GGCGGGCTGG CGCGGTTCAA CGGCCAGGCC TGCATGGTGC TCGGTCACCA GAAGGGCCGC 
GACACCCGCG AGCGTGCCGC GCGCAACTTC GGCATGGCCC GGCCCGAGGG TTATCGCAAG 
GCCTTGCGTT TGATGCGCCT GGCCGAGAAG TTCGGCCTGC CGGTGTTCAC CTTCGTCGAC 
ACGCCGGGCG CCTATCCGGG CATCGGCGCC GAGGAGCGTG GCCAGTCCGA GGCGATCGGC 
CGCAACATCT TCGAGATGGC GCAGCTCGAG GTGCCGATCA TCACCACCAT CATCGGCGAA 
GGCGGTTCGG GCGGCGCCCT GGCCATCAGC GTGGCCGATC AGGTGCTGAT GCTGCAGTTC 
TCGGTCTATT CGGTGATCTC GCCCGAAGGC TGCGCATCGA TCCTCTGGAA GACCTCCGAG 
CGAGCCAGCG ACGCCGCGGA GGCCCTGGGC ATCACCGCGC ACCGGCTCAA GGCGCTCGGC 
CTGATCGACA AGATCGTCAG CGAGCCGGTC GGTGGCGCAC ATCGCGATCC CAAGCAGATG 
GCGGCGCAGC TCAAGCGCGC GCTCAACGAT GCGCTGCGCC AGGTGGCCGA TCTCAAGACC 
CGCGAGCTGC TCGATCATCG TTACGAGCGC CTGCGTGGTT ACGGTCGATT CAGCGACACC 
AAGGCCTGA
 
Protein sequence
MSKRHFLEFE QPIAELETKI EELRYVQNES AVDISEEIDR LSKKSLRLAK DIYSSLSPWQ 
VTQIARHPQR PYTLDYVNEV FTDFEELHGD RSFADDLSIV GGLARFNGQA CMVLGHQKGR 
DTRERAARNF GMARPEGYRK ALRLMRLAEK FGLPVFTFVD TPGAYPGIGA EERGQSEAIG 
RNIFEMAQLE VPIITTIIGE GGSGGALAIS VADQVLMLQF SVYSVISPEG CASILWKTSE 
RASDAAEALG ITAHRLKALG LIDKIVSEPV GGAHRDPKQM AAQLKRALND ALRQVADLKT 
RELLDHRYER LRGYGRFSDT KA