| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1670 |
|---|
| Symbol | cysS |
|---|
| ID | 6163735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 1779428 |
|---|
| End bp | 1780801 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641664424 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_001790702 |
|---|
| Protein GI | 171058353 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC ACAACAGTCT GAGTCGCGAA CTCGAGACAT TCAAATCCAT CGAGCCCGGC
CACGTCCGCA TGTACGTCTG CGGCATGACG ATCTATGACC TCTGCCACAT CGGCCATGCC
CGCATGATGA TGGCGTTCGA CGTGGTCTAT CGCTGGCTGC GTGCGAGTGG CTGGCGTGTC
ACCTACGTGC GCAACATCAC CGACATCGAC GACAAGATCA TCCGCCGCGC GGTCGAGCGT
GGCATCACGA TCCGCCAGCT CACCGACGAG ATGATCGATG CCATGCACCG CGACATCGGC
GCGCTGGGCA TCGAGCGGCC CACGCACGAG CCGCGCGCCA CCGAGTACAT CCCGCAGATG
CTGTCGATGA TCTCGACCCT CGAAAGCAAG GGGCTGGCCT ATCGCAGCGG CAACGGCGAC
GTCAACTATG CGGTGCGTCG CTTCGAGGGC TACGGCAAGC TGTCGGGCAA GTCGCTCGAC
CAGTTGCGCG CCGGTGAGCG TGTCGCGGTG GCCGACGGCA AGGAAGACCC GCTCGATTTC
GTCCTCTGGA AGTCGGCCAA GCCGCAGGAG CCGGACGACG CCAAGTACGA CAGCCCGTAC
GGCCCGGGCC GCCCGGGTTG GCACATCGAG TGCTCGGCCA TGAGTTGCGC CCTGCTGGGC
GAGACCTTCG ACATCCACGG TGGCGGCCTC GATCTGCAGT TTCCGCACCA CGAGAACGAG
ATCGCGCAAA GCGAAGGCGC TCTGGGCCAT TCCTGGGTGC CGACCTGGAT GCACAACGGC
TTTCTCAACG TCGACAACGA GAAGATGTCG AAGTCGCTGG GCAACTTCTT CACCATCCGC
GATGTGCTGA AGAGTTACGA CGGCGAGACG GTGCGCTTCT TCATGTTGCG CGTGCAGTAC
CGCAGCCCGT TCAATTTCAG CGATGCCGGC CTCGACGATG CGCGCAGCTC GCTGACGCGG
CTCTACACGG CCCTCGATGG CGTTGCGGTC GACGATGCGA GCGAGATCGA CTGGACCCAT
CCGGCCGCCG CCCGTTTCAA GGCCGCGATG GACGATGACT TCAACACCCC GATCGCGGTG
TCGGTCCTGT TCGATCTGGC GGGTGAGGTC AACCGCAACA AGGACGCCGG CACGGCCGGC
CTGCTCAAGC GGCTCGGCGC TGTGCTGGGC GTGTTGCAGC AGTCGCCGCG CACGTTCTTG
CAAGGTGACA CCGGCGGGCT CGACGAAGCG CACATCCAGC AGCAGATCGG CGAGCGGCAG
GCGGCCAAGG CAGCGCGCAA TTTTGCCGAG GCAGACCGCA TCCGGCTTGC CTTGGCGGCC
CAGGGCATCA CGCTGAAAGA CACGCCCCAA GGCACCACCT GGGTCAAGGC TTGA
|
|---|
| Protein sequence | MRIHNSLSRE LETFKSIEPG HVRMYVCGMT IYDLCHIGHA RMMMAFDVVY RWLRASGWRV
TYVRNITDID DKIIRRAVER GITIRQLTDE MIDAMHRDIG ALGIERPTHE PRATEYIPQM
LSMISTLESK GLAYRSGNGD VNYAVRRFEG YGKLSGKSLD QLRAGERVAV ADGKEDPLDF
VLWKSAKPQE PDDAKYDSPY GPGRPGWHIE CSAMSCALLG ETFDIHGGGL DLQFPHHENE
IAQSEGALGH SWVPTWMHNG FLNVDNEKMS KSLGNFFTIR DVLKSYDGET VRFFMLRVQY
RSPFNFSDAG LDDARSSLTR LYTALDGVAV DDASEIDWTH PAAARFKAAM DDDFNTPIAV
SVLFDLAGEV NRNKDAGTAG LLKRLGAVLG VLQQSPRTFL QGDTGGLDEA HIQQQIGERQ
AAKAARNFAE ADRIRLALAA QGITLKDTPQ GTTWVKA
|
|---|
| |