| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1669 |
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| Symbol | |
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| ID | 6163734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1777272 |
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| End bp | 1779200 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664423 |
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| Product | ErfK/YbiS/YcfS/YnhG family protein |
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| Protein accession | YP_001790701 |
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| Protein GI | 171058352 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA GCCGATTCCA GCCCGTGACC GGTTCGGTCA TGCGTGCTCT TGTCGTGACC
TTGATCGCCG CGACCGTGCT GGTGCTGGGC ATGAACCTGA AGGCTGCTGC GCAGCTTCCG
ACGCGCGCCG ACGCGTCCGC GCACACGACC TTGCAATCGA CACCGCCAGC GTTGCGCGAG
CGCATCGAGG GGGCGATCCA GATCGCCGAA CGCGGTCAGC TCGACGAGGC CGCTGCGCTG
CTGCAGGAAC TGGCAAAGAC CTGGCCGGGC CGGCCGGAAC CCTGGCTGAA TCTGGCGGCG
CTGGCGTCTC GTCGACAAGA TGCGCACCAG GCGCGGCTCT ATCTGGAGGC AGCCTTGCGA
ACCAGTCCCG CACATGCTCA GGCCTACGAT CAACTGCAGC AGCTCAATGC CGACATGGCG
CGCAAGGCCT ACGCCAAGGC CCTGGCACCT GCCGCAGCGC CCGCCGAGCC TGCCGTGCTG
CCATGGACGA GCTCATTTGC AGATGAATCC GCCGGAACCG TCGAGCCTCC CGTCGCCCCC
GCCTCTGACG CGCGGCAGGC ACCGGCACCG TCGCCGGCAG TGACCGCGTC GACTCGCACG
GCGCCTGCCG CATCCGGCCC GATGACACCC GCCACCACAC GCCGGACCAG TGATCCCTCG
AACCCGTCGG GCACCGGCAC ATCGATCGCC TGGTTGACGG CCGCCGCGCT GACGCTGCTG
ATGGCCGCCG CGGCAGGCAC GGTCTGGGCA CAACGCCAGC GCAGCAGACC GGCCGGACCG
GCCATCGGCG GCGACGCAGC CACCCGAACC GCGGCGACCC TCACGTCCCC CGAAGCACGC
CTGATCGACA TCTACCGGCT GATCGGTGCG GCACGCCTGC CCGAAGCCCT GGCTGCTGCG
GAGGCGCTGA CCCGCGACAC GCCGCGCTTC AGCCTGGCGC AGCTGGTCTA CGGCGATCTG
CTGCTGGCGC AGACCGGTGC GCTGATCGAC ATGGGCCAGG GCGCGAACGC GGTCGACCCG
CGCGCCGCCC ACGACGTCCA GGCCCTGCGG CAGGAAGCCT CGTTGCGCCT GCAGGCCTTG
CGCGACCTTC CACCGGCCGG CGCCTGGCCG AAGCAGGTGC TGCAACTCGC GCCATCGGTG
CGCCATCTGG TGGCGGTCGA CACATCCCGC TCACGCCTGT ACGTGCTCGA AAACCAGCCG
GGCGGTCCGC GCCTGATCGC CCATCACTAC GTCTCGATCG GCAGCCAGGG CGTCGGCAAG
CGCGAAGAAG GCGACCAGCG CACGCCGCTG GGCACCTACT ACATCACCTC CAAACTCGAC
GGCAAGCAGC TCGGTGATTT CTACGGCGCC GGCGCCCTGC CCCTCAACTA TCCGAACGAT
CACGATCGGC ATCTCGGGCG CACCGGCGCC AACATCTGGC TGCACGGCAC GCCGTCGGCG
CAATTCGCCC GGGCGCCGCG CGCCACCAAT GGCTGCATCG TGCTGGCCAA CGACGACCTG
GCCCGCTGGC TGCGCGAACT CGCCCCCAGG TCGACCCCCG TGGTGGTGGC AGACCGCCTC
GAATGGGTCC ATCCGAAAGC ATTGAGCACC GACCGGCAGA CCGCGCTGGC GCTGGTCGAA
TCCTGGCGGC GTGCGCGCGT GCACGAGGAC GTCGCGTCGC TGATGGCACT CTATGCGCAG
CATTTCGACA ACGGCGAATC GGGCTACGAC GCCTGGCGCG CCCAGCTCGA AAGCGAGGCG
CAGGCCACGC ACGGACGCGA ACGCCAGCTC GACGACATCA GCGTGCTGGC CTGGCACGAG
CGCAGCGATG TGCGGGTGAT CACCTTCACC GAGGTGCTGC GCGGCAGCAC GCGCGCAATC
ACGCGGCGCC AGTACTGGTC GCACGAAAGT GGACAATGGA AGATCTTTTC CGAAGGAGTC
ATCGAATGA
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| Protein sequence | MLQSRFQPVT GSVMRALVVT LIAATVLVLG MNLKAAAQLP TRADASAHTT LQSTPPALRE
RIEGAIQIAE RGQLDEAAAL LQELAKTWPG RPEPWLNLAA LASRRQDAHQ ARLYLEAALR
TSPAHAQAYD QLQQLNADMA RKAYAKALAP AAAPAEPAVL PWTSSFADES AGTVEPPVAP
ASDARQAPAP SPAVTASTRT APAASGPMTP ATTRRTSDPS NPSGTGTSIA WLTAAALTLL
MAAAAGTVWA QRQRSRPAGP AIGGDAATRT AATLTSPEAR LIDIYRLIGA ARLPEALAAA
EALTRDTPRF SLAQLVYGDL LLAQTGALID MGQGANAVDP RAAHDVQALR QEASLRLQAL
RDLPPAGAWP KQVLQLAPSV RHLVAVDTSR SRLYVLENQP GGPRLIAHHY VSIGSQGVGK
REEGDQRTPL GTYYITSKLD GKQLGDFYGA GALPLNYPND HDRHLGRTGA NIWLHGTPSA
QFARAPRATN GCIVLANDDL ARWLRELAPR STPVVVADRL EWVHPKALST DRQTALALVE
SWRRARVHED VASLMALYAQ HFDNGESGYD AWRAQLESEA QATHGRERQL DDISVLAWHE
RSDVRVITFT EVLRGSTRAI TRRQYWSHES GQWKIFSEGV IE
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