| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1646 |
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| Symbol | aceE |
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| ID | 6161679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1752209 |
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| End bp | 1754920 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664400 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001790678 |
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| Protein GI | 171058329 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.272523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAG TGCCCCAGAA CCAGCCCGCA GCGGCAACCA ACGATCCCGA CACCCAGGAA
ACCCGCGAAT GGATGGACGC ACTGTCCGCC GTCATCGGTG CCGAGGGGGG TGAGCGCGCC
CACTTCCTGC TCGAGCAGCT GATCGACCAG GCCCGCCAGG CCGGCATCGA CGTGCCGTTC
TCGGCCAACA CGGCCTACGT CAACACCATC CCGACCGACC AGGAAGAGCG TTGCCCCGGC
AACATCGAGA TCGAGGAGCG CCTGCGCGCC TACATGCGCT GGAACGCGAT GGCGATGGTG
GTCAAGGCGA ACCGCCACAA CCCCGAGGAC GGTGGCGACC TGGGCGGCCA CATCGGCTCG
TTCGCGTCGC TGGCGCACAT GTTCGGCGCC GGCTTCAACC ACTTCTGGCA CGCCGAGAAC
GAGAACCACG GCGGCGACTG CCTCTACATC CAGGGCCACG TGTCGCCCGG TGTCTACGCC
CGCGCCTACA TGGAAGGCCG CCTGACCGAA GAGCAGCTGC TCAACTTCCG CCAGGAAGTC
GACGGCAAGG GCCTGTCGAG CTACCCGCAC CCGAAGCTGA TGCCCGAGTT CTGGCAGTTC
CCGACCGTCT CGATGGGCCT GGGCCCCTTG ATGGCGATCT ACCAGGCGCG TTTCCTGAAG
TACCTGCACG CGCGCGGCAT CGCCAACACC GAGAACCGCA AGGTCTGGGT CTTCTGCGGC
GACGGCGAGA TGGACGAACC CGAATCGCTC GGCGCGATCG GCCTGGCCGC ACGCGAGAAC
CTCGACAACC TGATCTTCGT CATCAACTGC AACCTGCAGC GCCTGGACGG CCCGGTGCGC
GGCAACAGCA AGATCGTCCA GGAGCTCGAA GGCGAGTTCC GCGGCTCGGG CTGGAACGTC
ATCAAGCTGC TGTGGGGTTC GGGCTGGGAC GCGCTGCTGG CGCGCGACAA GGACGGCGCG
CTGCGCAAGC TGATGATGGA GACGCTCGAC GGCGACTACC AGTCCTTCAA GGCCAACGAC
GGCGCCTACG TGCGCAAGCA CTTCTTCGGT CGCGACCCGC GCACGCTGGA GATGGTGGCC
AAGATGTCCG ACGACGACAT CTGGAACCTC AAGCGCGGTG GCCACGATCC GCAGAAGGTC
TACGCGGCGT ACCACAAGGC GGTCAACCAC AAGGGCCAGC CGACGGTGCT GCTGATCAAG
ACCGTCAAGG GCTTCGGCAT GGGCAAGGTC GGCGAGGGCA AGAACACCGT CCACCAGACC
AAGAAGCTGA TCGACGAGGA CATCAAGGCC TTCCGCGACC GCTTCAACAT CCCCATCCCC
GACAGCGAGC TGCCCAAGCT GCCGTTCTAC AAGCCGGCCG ACGACACGCC GGAAATGCGC
TACCTGCACG AGCGCCGCAA GGCCCTGGGC GGCTACCTGC CCAAGCGCCG CGCCAAGGCC
GACGAGAGCT TCACCGTGCC GTCGCTGGAA ACCTTCAAGG CCGTGCTCGA GCCGACCGCC
GAAGGCCGCG AGATCTCCAC CACCCAGGCC TACGTGCGCT TCCTGACGCA GCTGCTGCGT
GACCAGGCGA TCGGCCCGCG CGTGGTGCCG ATCCTGGTCG ACGAGGCCCG CACCTTCGGC
ATGGAAGGCC TGTTCCGCCA GGTCGGCATC TACAACCCCG CTGGTCAGAA CTACACCCCG
GTCGACAAGG ACCAGGTGAT GTACTACCGC GAGGACAAGG CCGGCCAGAT CCTGCAGGAA
GGCATCAACG AAGCCGGCGG CATGAGCAGC TGGATCGCCG CGGCCACCTC GTACAGTACG
AGCAACCGGA TCATGATCCC GTTCTACGTG TACTACTCGA TGTTCGGCTT CCAGCGCATC
GGCGACCTGG CCTGGGCGGC CGGCGACATG CAGGCGCGCG GCTTCCTGCT CGGCGGCACG
TCGGGGCGCA CCACGCTCAA CGGCGAAGGC CTGCAGCACG AGGACGGCCA TAGCCACATC
CTGGCCGGCA CGATCCCGAA CTGCATCAGC TACGACCCGA CCTTCGCGCA CGAGGTCGGC
GTGATCATGC AGCACGGTTT GAAGCGCATG GTCGAGAAGC AGGAAAACGT CTTCTACTAC
CTGACCCTGC TCAACGAGAA CTACCCGATG CCCGGCCTGA AGGCGGGCAC CGAGGAGCAG
ATCATCAAGG GCATGTACCT GCTCGAAGAA GGCCAGGGCG CAGCCGGCGC ACCGCGCGTC
AACCTGCTGG GCTCGGGCAC GATCCTGCGC GAGTCGCAGT TCGCCCGGCA GCTGCTGGCG
CAGGACTGGG GCGTGGCTGC CAACGTCTGG AGCTGCCCGA GCTTCAACGA ACTGGCCCGC
GACGGCCAGG ACGCCGAGCG CTTCAACCTG CTGCACCCGA CCGCCACCCC CAAGGTGCCG
TTCGTGGCGC AACAGCTGCA GCCGCACATC GGCCCGGTCG TGGCTTCGAC CGACTACATG
AAGAACTACG CCGACCAGAT CCGCGCCTTC ATCCCGCGCG GGCGCAGCTT CAAGGTGCTG
GGCACCGACG GCTTCGGCCG CAGTGACTTC CGCAGCAAGC TGCGCGAGCA CTTCGAGATC
AACCGCCATT ACATCGTCGT GGCCGCCCTG CGCGCGCTGG CCGACGAAGG CGCCGTGCCG
ACCACCGTGG TGGCCGAGGC GATCGCCAAG TACGGCATCA AGGCCGACAA GATCAACCCG
CTGTACGCCT GA
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| Protein sequence | MSAVPQNQPA AATNDPDTQE TREWMDALSA VIGAEGGERA HFLLEQLIDQ ARQAGIDVPF
SANTAYVNTI PTDQEERCPG NIEIEERLRA YMRWNAMAMV VKANRHNPED GGDLGGHIGS
FASLAHMFGA GFNHFWHAEN ENHGGDCLYI QGHVSPGVYA RAYMEGRLTE EQLLNFRQEV
DGKGLSSYPH PKLMPEFWQF PTVSMGLGPL MAIYQARFLK YLHARGIANT ENRKVWVFCG
DGEMDEPESL GAIGLAAREN LDNLIFVINC NLQRLDGPVR GNSKIVQELE GEFRGSGWNV
IKLLWGSGWD ALLARDKDGA LRKLMMETLD GDYQSFKAND GAYVRKHFFG RDPRTLEMVA
KMSDDDIWNL KRGGHDPQKV YAAYHKAVNH KGQPTVLLIK TVKGFGMGKV GEGKNTVHQT
KKLIDEDIKA FRDRFNIPIP DSELPKLPFY KPADDTPEMR YLHERRKALG GYLPKRRAKA
DESFTVPSLE TFKAVLEPTA EGREISTTQA YVRFLTQLLR DQAIGPRVVP ILVDEARTFG
MEGLFRQVGI YNPAGQNYTP VDKDQVMYYR EDKAGQILQE GINEAGGMSS WIAAATSYST
SNRIMIPFYV YYSMFGFQRI GDLAWAAGDM QARGFLLGGT SGRTTLNGEG LQHEDGHSHI
LAGTIPNCIS YDPTFAHEVG VIMQHGLKRM VEKQENVFYY LTLLNENYPM PGLKAGTEEQ
IIKGMYLLEE GQGAAGAPRV NLLGSGTILR ESQFARQLLA QDWGVAANVW SCPSFNELAR
DGQDAERFNL LHPTATPKVP FVAQQLQPHI GPVVASTDYM KNYADQIRAF IPRGRSFKVL
GTDGFGRSDF RSKLREHFEI NRHYIVVAAL RALADEGAVP TTVVAEAIAK YGIKADKINP
LYA
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