| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1630 |
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| Symbol | |
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| ID | 6160962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1732360 |
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| End bp | 1733049 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664384 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001790662 |
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| Protein GI | 171058313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00531953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACGA TCGCAACACG CCTACAACAA GTGCACGGAC GCCTTACCAA CGCTTGCAGA
GCCGCGCAGC GGCCCGACAA CAGCGTGGCG CTGCTGGCCG TGAGCAAGAC CCAGCCCGCC
GACGCCATCC GCTGCGCCCA TGCCGCCGGC CAGCGCGCCT TCGGCGAGAA CTACGTGCAG
GAGGCGCTCG CCAAGATCGC GCAGCTGGCC GACCTGCGCC AGCAGATCGA GTGGCACCTG
ATCGGCCCGC TGCAGGGCAA CAAGACCCGC GTGGTGGCCG AAGCCTTCGA CTGGGTGCAC
AGCATCGACC GCCTCAGGAT CGCGCAGCGC CTGAGCGAAC AGCGCCCGGC CGGCGCCGCG
CCGCTGCAGG TCTGCCTGCA GGTCAACATC AGCGGCGAGG CCAGCAAGAG CGGCCTCGCA
CCCGCCGACG TGGCCGACGT CGCCCACGCC GTGGCGGCCC TGCCGCGCCT GCGGCTGCGC
GGCCTGATGG CCATCCCCGA GCCCGACGGC GACCTCGAAT CGCAACGCCG GCCGCACCGC
GCGCTGCGCG AGCTGTTCGA GTCGCTGCAG GCCCGGGGGC TGGCGCTGGA CACCCTGTCG
ATGGGCATGA GCGCCGACCT CGAGGCCGCG GTGCTGGAAG GCGCGACGAT GGTGCGGATC
GGCACGGCGG TGTTCGGCGC ACGGGCTTGA
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| Protein sequence | MTTIATRLQQ VHGRLTNACR AAQRPDNSVA LLAVSKTQPA DAIRCAHAAG QRAFGENYVQ
EALAKIAQLA DLRQQIEWHL IGPLQGNKTR VVAEAFDWVH SIDRLRIAQR LSEQRPAGAA
PLQVCLQVNI SGEASKSGLA PADVADVAHA VAALPRLRLR GLMAIPEPDG DLESQRRPHR
ALRELFESLQ ARGLALDTLS MGMSADLEAA VLEGATMVRI GTAVFGARA
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