| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1618 |
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| Symbol | |
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| ID | 6163508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1717169 |
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| End bp | 1718326 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664372 |
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| Product | flagellar biosynthetic protein FlhB |
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| Protein accession | YP_001790650 |
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| Protein GI | 171058301 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.053474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA GTGCACAAGA CAAACACCTG CCCCCGACCG AGCGGCGCCT GCAGAAGGCC
CGCGAGGACG GGCAGGTGGC GCGCTCGCGC GATCTGGCGC ACTTCGCGGT GGTGGCCGCC
GGCCTGGCGC TGGTGATGTT CGCCGCGCCC AGCCTGACCC AGTGGCTGCG CGACCTGATG
GCCACCGGCC TGCGCTTCGA CGTGCGCATG GTGACGTCGC CGCAGATGAT GGGCGAGCGG
CTGTCGCAGC TGATGTATCC GGCGCTGGCG CTGTGCCTCG GGCTCGGTGT CGTCACCGGC
CTGGTGGCGA TGGCCGCGGC GGTGGTCTCG GGCGGCTGGG TCTGGACCTT CAAGCCGCTG
ATGCCCGACT TCAGCAAGCT CAACCCGCTC ACCGGCCTGG GCCGCATCGT CTCGAAGGCG
CAGATCGGCG ACATGCTCAA GGCCTGCCTG CTGGCGCTGA TCCTGGCCAG CGTCGGCGCG
GCCTATCTGT GGGCGCACCT GAACGATTTC GCGCTGACGC AGTCGATGCC GCTGCCGGCG
GCCTTCATCG CCGCGACCGA CCGCATCTCG ACCGGCCTGT GGCTGCTGAT GATCGTGCTG
GCCGCCTCGG CGATGGTCGA CGTGCCGCTG CAGCGCTTCA TGCACCGCAA CCGCCTGAAG
ATGAGCCATC AGGACATGAA GGAAGAGTTC AAGCAGCAGG AGGGCAACCA GGAGGTCAAG
GGCAAGATGA AGCAGCGCAT GCGCGAGGGC TCGCGCCGTC GCATGCTGGC CGCGGTGCCC
GAGGCCGATC TGGTGGTGAT GAACCCGACC CACTACGCGG TGGCGCTCAA GTACGACGAC
GCCTCGATGG GCGCGCCGCG CATCGTCGCG ATGGGCGCCG ACCTGCTGGC GCTGAAGATC
CGCGACGTTG CCAAGGAATC CAAGGTGCCG GTGCTGCAGT CGCCGCCGCT GGCACGCGCG
CTGTATGCGC ACGGCGAGCT CGACCGCGAG ATCCCGCTGG CGCTCTACAG CGCGGTGGCG
CAGGTGCTCG CGCACGTGTT CCAGCTGCGC GCCGCGCTGG CCGGCCGCGC CGCCTGGCCG
AGCGACCTGC CGCCGATCCC GGTGCCGCCC GAGCTCGATC CGCACAACAC CGCCAGACCG
ACTGAGGACA AGGCATGA
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| Protein sequence | MADSAQDKHL PPTERRLQKA REDGQVARSR DLAHFAVVAA GLALVMFAAP SLTQWLRDLM
ATGLRFDVRM VTSPQMMGER LSQLMYPALA LCLGLGVVTG LVAMAAAVVS GGWVWTFKPL
MPDFSKLNPL TGLGRIVSKA QIGDMLKACL LALILASVGA AYLWAHLNDF ALTQSMPLPA
AFIAATDRIS TGLWLLMIVL AASAMVDVPL QRFMHRNRLK MSHQDMKEEF KQQEGNQEVK
GKMKQRMREG SRRRMLAAVP EADLVVMNPT HYAVALKYDD ASMGAPRIVA MGADLLALKI
RDVAKESKVP VLQSPPLARA LYAHGELDRE IPLALYSAVA QVLAHVFQLR AALAGRAAWP
SDLPPIPVPP ELDPHNTARP TEDKA
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