| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1615 |
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| Symbol | |
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| ID | 6163505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1713753 |
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| End bp | 1714688 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664369 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001790647 |
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| Protein GI | 171058298 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0196883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA CCGAACTGCG CTACATCGTT GCCGTCGCGC GCGAGCGACA TTTCGGCCGC
GCCGCCGAGG CCTGTTTCGT CTCGCAGCCG ACGCTGTCGG TGGCGATCAA GAAGCTGGAA
GAAGAACTCG AGATCAAGCT CTTCGAGCGC GGCGGCAGCG AGGTCAGCGT CACGCCGCTG
GGCGAGGAGA TCGTGCGCCA GGCCCAGGCC ACGCTGGAGA GTGCCGCCTC GATCAAGGAG
ATCGCCCGGC GCGGCAAGGA TCCGCTGGCC GGCCCGCTGC GGCTGGGCGT GATCTACACC
ATCGGCCCCT ACCTGCTGCC CGAACTGGTG CGCAAGACCA TCGAGCGGGT GCCGCAGATG
CCGCTGATGC TGCAGGAGAA CTTCACCGTG CGCCTGCTCG AGATGCTGCG CACCGGCGAG
CTCGACTGCG CCATCCTGGC CGAGCCCTTC CCCGACACCG GCCTGGCGGT CGCGCCGCTC
TACGACGAGC CGTTCATGGT CGCCGTGCCC TGCCGACATC CGCTGGCCGA GCGCGCGTGC
ATCTCGTCGA CCGAGCTCAA GCAGGAGACC ATGCTGCTGC TCGGCACCGG CCACTGCTTC
CGCGATCACG TGCTCGAGGT CTGCCCGGAG TTCGCGCGCT TCTCCAGCGA CACCGAAGGC
ATCCGCAAGA GCTTCGAGGG CTCCTCGCTC GAGACCATCA AGTACATGGT GGCCTCGGGC
ATGGGCATCA CGGTGGTGCC GCAGCTGTCG ATCCCGCGCG CCGGCTTCAG CGACGGCACG
CCGCTGATCA GCTACGTGCC CTTCGACGAG CCGGTGCCGA CCCGGCGCGT GGTGCTGGTG
TGGCGGCGCA CCTTCACGCG CTACGAGGCG ATCGCCGCGC TGCGCAACGC GATCTACGCC
TGCAGCCTGC CGGGCGTGAG CCGGCTGACC GACTGA
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| Protein sequence | MTLTELRYIV AVARERHFGR AAEACFVSQP TLSVAIKKLE EELEIKLFER GGSEVSVTPL
GEEIVRQAQA TLESAASIKE IARRGKDPLA GPLRLGVIYT IGPYLLPELV RKTIERVPQM
PLMLQENFTV RLLEMLRTGE LDCAILAEPF PDTGLAVAPL YDEPFMVAVP CRHPLAERAC
ISSTELKQET MLLLGTGHCF RDHVLEVCPE FARFSSDTEG IRKSFEGSSL ETIKYMVASG
MGITVVPQLS IPRAGFSDGT PLISYVPFDE PVPTRRVVLV WRRTFTRYEA IAALRNAIYA
CSLPGVSRLT D
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