| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1592 |
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| Symbol | |
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| ID | 6162999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1689932 |
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| End bp | 1690711 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664346 |
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| Product | imidazoleglycerol phosphate synthase, cyclase subunit |
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| Protein accession | YP_001790624 |
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| Protein GI | 171058275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00155094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCCA AACGCATCAT TCCCTGCCTC GACGTCACCG GCGGCCGTGT CGTCAAGGGT
GTCAACTTCG TCGAACTGCG TGACGCCGGC GACCCGGTCG AGATCGCCGC GCGCTACAAC
GAGCAGGGCG CCGACGAGCT GACCTTTCTC GACATCACCG CCACCAGCGA CGGCCGCGAC
CTGATCCTGC ACATCATCGA GGCGGTGGCC TCGCAGGTGT TCATCCCGCT GACGGTGGGC
GGGGGCGTGC GCACGGTCGA GGATGTGCGC CGGCTGCTCA ACGCCGGGGC CGACAAGGTC
AGCTTCAACT CGGCGGCGGT GGCCAACCCG CAGATCATCC GCGACGCCTC CGACAAGTAC
GGCGCGCAGT GCATCGTGGT GGCGATCGAC GCCAAGAAGC GGGTCGGCGA CGACCTCGCG
GCCAAGGGCC CGGGCTGGGA CGTCTACACC CACGGCGGCC GCAAGAACAT GCACATCGAC
GCGGTGGCGT GGGCGACCCG GATGGCGCAG ATGGGCGCCG GCGAGATCCT GCTCACCAGC
ATGGACCGCG ACGGCACCAA GATCGGCTTC GACCTCGACC TGACCCGCGC GGTGGCCGAC
GCGGTGCCGG TGCCGGTGAT CGCCTCGGGC GGCGTCGGCA ACCTCGAGCA CCTGGCCGAC
GGCGTGCAGA AGGGTGGGGC GGACGCGGTG CTGGCTGCCA GCATCTTCCA CTACGGCGAA
TACACCGTGG CGCAGGCCAA GGCGGTGATG GCTGCGCGCG GGATACCCGT GCGGTTTTGA
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| Protein sequence | MLAKRIIPCL DVTGGRVVKG VNFVELRDAG DPVEIAARYN EQGADELTFL DITATSDGRD
LILHIIEAVA SQVFIPLTVG GGVRTVEDVR RLLNAGADKV SFNSAAVANP QIIRDASDKY
GAQCIVVAID AKKRVGDDLA AKGPGWDVYT HGGRKNMHID AVAWATRMAQ MGAGEILLTS
MDRDGTKIGF DLDLTRAVAD AVPVPVIASG GVGNLEHLAD GVQKGGADAV LAASIFHYGE
YTVAQAKAVM AARGIPVRF
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