Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1588 |
Symbol | |
ID | 6163007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1686581 |
End bp | 1687708 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641664342 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_001790620 |
Protein GI | 171058271 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00615435 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTCCA GCACCGCCTC CCAGCCGCTC GCCACCCGCC TGCAAGCCAC CTTGCGCCAG GACGTGCAGG GCATGCACGC CTACGCGGTG CAGCCCAGCG CCGGCTACAC CAAGCTCGAC GCGATGGAAA ACCCGTTCAC GCTGCCGCCC GAGCTGCAGC ATGAGCTGGG CGAGCGCCTC GGCCGTGTCG CGATCAACCG TTACCCGGGC GGCCGCGTCG ACGACCTGAA GGCTGCGCTC GCGCAGCACA TCGATCTGCC CGCCGGTTGC AGCCTGATGC TCGGCAACGG CTCGGACGAG CTGATCGCCT TGCTGGCGCT GGCCTGCGAC GTGCCCGGTG CCAAGATCCT GGCGCCCGTG CCCGGCTTCG TGATGTACGC GATGTCGGCG CAGTTGCAGG GGCTGGAATT CGTCGGCGTG CCGCTGACGG CCGAGTTCGA GCTGGACGAG GCGGCGATGC TCTCGGCCAT CGAAACGCAT CGCCCGGCCA TCACCTACAT CGCCTACCCG AACAACCCGA CCGCGAACCT GTTCGACGAG TCGACGATCG AGAAGATCGT CGCGGCGGTG GGTGCGCAGA ACGGCCTGGT GGTGTTCGAC GAGGCCTATC AGCCGTTTTC GTCGCGCAGC TGGATGGGCC GCGTCGGCCG GCACGACCAC GTGCTGGTGA TGCGCACGCT CAGCAAGTTC GGCCTGGCCG GCATCCGCCT GGGCTACATG GCCGGCCCGG CGGCGCTGAT CGCCGAGATC GACAAGGTGC GCCCGCCGTA CAACGTCAGC GTGCTGAACG CGGAAGCGGC ACTGTTTGCA CTCGAACACG CCGACGAATA CGCCCGCCAG GCCGCGATCC TGCGCGCCGA GCGCGAGCGG CTGCAGGCGG CGCTCAACGC CATGCCCGGC GTGCAGAGCC ATCCGAGCGA GGCCAACATG ATCCTGGTGC GTGTCGCCGA CGGCGCGGCG GTGTTCGCCG GCCTGAAGCA GCGCGGCGTG CTGATCAAGA ACGTCGCCGG CCTGCATCCG TCGCTGAAGA ACTGCCTGCG CCTGACGGTG GGCACGCCCG AGGAAAATCA GCAGATGTTG GCGGCACTGG CCGCCGCCGT GATGTCCGTG ATGGAAAAGC AGTCATGA
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Protein sequence | MSSSTASQPL ATRLQATLRQ DVQGMHAYAV QPSAGYTKLD AMENPFTLPP ELQHELGERL GRVAINRYPG GRVDDLKAAL AQHIDLPAGC SLMLGNGSDE LIALLALACD VPGAKILAPV PGFVMYAMSA QLQGLEFVGV PLTAEFELDE AAMLSAIETH RPAITYIAYP NNPTANLFDE STIEKIVAAV GAQNGLVVFD EAYQPFSSRS WMGRVGRHDH VLVMRTLSKF GLAGIRLGYM AGPAALIAEI DKVRPPYNVS VLNAEAALFA LEHADEYARQ AAILRAERER LQAALNAMPG VQSHPSEANM ILVRVADGAA VFAGLKQRGV LIKNVAGLHP SLKNCLRLTV GTPEENQQML AALAAAVMSV MEKQS
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