| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1574 |
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| Symbol | |
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| ID | 6163273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1672636 |
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| End bp | 1673295 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664328 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001790606 |
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| Protein GI | 171058257 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.347453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCT TGCTGGTCGA TGACCACTCG CTGTTCCGCG AGGGCCTGAC GATGCTGATG
GCGCAGCGTT TCCCGGCGGT CGAGCTGTTC GACGTGGGCG ACCTGAACGA CGCCGAGGCG
GTGCTCGGCA CCGAGCCCGG CATCGAGCTG ATCCTGCTCG ACCTCGGCCT GCCCGACAGC
CAGGGGCTCG ACAGCCTGCA ACGCCTGCGC AGCGTGGTGC CCGAGGTGCC GATCGTCGTG
ATGTCGGCCG ACGAGCGGCC CGAGACGATC CTGGCCGCGA TCGACCAGGG CGCGGCCGGC
TTCATCCCCA AGACCGCGCG CATCGGTGCG ATCGAGAGCG CCCTGCGGGT GGTGCTCGAC
GGCGGCATCT TCCTGCCGCA GGGCATCTAC CGCAGCATCG CGCCGCCGCT TGCCGACGGG
CCGGAGGTGG ATGAGGCGCA GGCGGCGCTG ATGCAGTCGC TGGGCCTGAC GCCGCGCCAG
CTCGACGTGT TGCGGCTGAT GGCGCTGGGC CAGTCGAACA AGCAGATCTC GCGTGCGCTC
AGCGTGGCCG AGTCGACCAT CAAGACCCAC GTGGCGGTGG TGTTCCGCCG GCTCGACGTC
ACCTCGCGCA GCCAGGTCAT GGTCGCCGCC GCACGCATGG GCCTGCGCTT CGAGCGCTGA
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| Protein sequence | MKALLVDDHS LFREGLTMLM AQRFPAVELF DVGDLNDAEA VLGTEPGIEL ILLDLGLPDS
QGLDSLQRLR SVVPEVPIVV MSADERPETI LAAIDQGAAG FIPKTARIGA IESALRVVLD
GGIFLPQGIY RSIAPPLADG PEVDEAQAAL MQSLGLTPRQ LDVLRLMALG QSNKQISRAL
SVAESTIKTH VAVVFRRLDV TSRSQVMVAA ARMGLRFER
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