| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1572 |
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| Symbol | |
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| ID | 6163271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1671161 |
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| End bp | 1671961 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664326 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001790604 |
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| Protein GI | 171058255 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.36409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCG TTTCAACTTC TGCCGCCGTC GTGGCCCCCG TCGCCGAGGC GGTTCAAGCT
GGTGTCGGAT TTGGCCATTT CATCGCCCAG TCTGACGCCG TCGGCAAGAC GCTGCTGGCC
GTGCTGGTGC TGATGTCGGT CGCCTCCTGG GCGCTGATCC TGATCAAGGG CCTGACGCAG
CTGATCCGCC AGCGCCGCAG CGGCCAGTTC CTGAACTTCT TCTGGAACGC GCGCTCGCTC
GATGAAGTGA GCGCCGAGAT CCAGACCCAC GGCGCGCGCG ATCCCTTCGG CCACCTGGCG
GCGCACGCCA TCCACGCCCA GGCCCACCAC GCCCGCTACG GCGCAGCCAA GCTGCAGGAG
GCCGGCACCT CGCAGGAGTT TGTCACCCGC ACCATCAAGA AGGTGCTCGA CGAAGAGACC
ACCCGGCTCG AAAACGGCCT GACCACGCTC GCCACCATCG GCGCCACCGC GCCGTTCGTC
GGCCTGTTCG GCACCGTGTG GGGCGTCTAC CACGCGCTGC TGGCGATCGG CATGAGCGGC
GCGGGCACGC TCGACAAGGT GGCCGGCCCG GTCGGCGAGG CGCTGATCAT GACCGGCATC
GGCCTGGCCG TGGCGATCCC CGCGGTGATG GCCTACAACG CCATCAGCCG CAGCAACCGG
GTGCTCAACG CCCGGCTCGA CGCCTTCGCG TTCGAGCTGC TGACCTTCCT GTCGACCGGC
TCGACGCTGG CCAGCGGCCA GGCCGTGCGC CCGGCCGAGG CCGCCGCCGA CGTGCGCCCG
CTGCGCGCCG CCCACACCTG A
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| Protein sequence | MEPVSTSAAV VAPVAEAVQA GVGFGHFIAQ SDAVGKTLLA VLVLMSVASW ALILIKGLTQ
LIRQRRSGQF LNFFWNARSL DEVSAEIQTH GARDPFGHLA AHAIHAQAHH ARYGAAKLQE
AGTSQEFVTR TIKKVLDEET TRLENGLTTL ATIGATAPFV GLFGTVWGVY HALLAIGMSG
AGTLDKVAGP VGEALIMTGI GLAVAIPAVM AYNAISRSNR VLNARLDAFA FELLTFLSTG
STLASGQAVR PAEAAADVRP LRAAHT
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