Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1521 |
Symbol | |
ID | 6161566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1607599 |
End bp | 1608462 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641664276 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001790554 |
Protein GI | 171058205 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0919196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCG ACCACCCGAA CGGCGGCAGC GTCTACGCCT ACACCGGCGG CCGAGCCTGG GAGACCAGCG CGGCCGACGC CCGGCCCTGC GTCGTGATGC TGCACGGCGC GCTCAACGAC CACAGCGTCT GGACCCTGCC GGCGCGCTGG CTGGCCCATC ACGGCCGGGA CGTGCTGGTG CCCGATCTGC CCGGCCACGG CCGCAGCGGC GGCCCGGTGC TGCCGGACGT CGGCGCGCTG GCCGACTGGC TGCTCGCGCT GCTCGATCGA CTGGGGCGGC GCCGCGTCGC GCTGATCGGC CACAGCATGG GCTCGCTGAT CGCGCTGGAA GCGGCGTCAC GGGCCGTCGG CTCGGCCTTG GACGTCAGTC ATCTGGTGCT GGTCGGCACG GCGGTGCCGA TGCCGGTGTC GGCCGCGCTG CTGGCCACGG CGGCACAACA GCCGCTGCAG GCGATCGAGA TGGTGGTGAG CTTTGCCCAC AGCAGCCTGG GCGCCAAACC CGGCAATCCC GGCCCGGGCA CCTGGCACCA CGGCGCAAGC CGCCAGCTGA TGCGCCAGGT GCTGGCGCGC TCGATGGCGG CGGGCGAATC GGCGGGCGTC GAGCACAACC TGTTCCACCA CGATTTCGGC ATCTGCAACG CCTACCAGGA CGGGATGGCC GCGGCCGCGC GAGTGGCCGC AGCCGGTGCC ACGCGCTGCA GCGTGGTGGT GGGCGAGCGT GACCGGATGA CCGCGCCGCG CGCAGCGCAA GACGTCACGG CCGCGTTGGC GGCGCAGCGC CTGGGCCTGC CCAAGGCCGG CCACGACCTG ATGCAGGAAG ACCCCGAAGG CCTGCTGCAG GCCTTGCGGC GCGCGCTGAT CTGA
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Protein sequence | MLIDHPNGGS VYAYTGGRAW ETSAADARPC VVMLHGALND HSVWTLPARW LAHHGRDVLV PDLPGHGRSG GPVLPDVGAL ADWLLALLDR LGRRRVALIG HSMGSLIALE AASRAVGSAL DVSHLVLVGT AVPMPVSAAL LATAAQQPLQ AIEMVVSFAH SSLGAKPGNP GPGTWHHGAS RQLMRQVLAR SMAAGESAGV EHNLFHHDFG ICNAYQDGMA AAARVAAAGA TRCSVVVGER DRMTAPRAAQ DVTAALAAQR LGLPKAGHDL MQEDPEGLLQ ALRRALI
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