| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1512 |
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| Symbol | |
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| ID | 6163338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1596452 |
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| End bp | 1598452 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641664267 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001790545 |
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| Protein GI | 171058196 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00433523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAGC TCTCTCAATC CACCCTGCTG GCCGTGCCGC TGGCACCGCT GGCGGGGGCC
GTCATCGCCG GCTTCTTCGG CAAGACGGTG GGCCGCCGCG GCTCCCATGT CGTCACCATC
CTCGGTGTGC TGATCGCCTT CGTCCTGTCG GTGATGACGC TGCTCGACGT GATCGGCGGC
GCACGCTTCA ACCAGACCGT CTATGAATGG ATGGTGCTGG GCACGCTGAA GATGGAAGTC
GGCTTCCTGG TCGACGGCCT GACCGCCATG ATGATGGTGG TGGTCACCTT CGTGTCGCTG
ATGGTGCACA TCTACACCAT CGGCTACATG GAAGAAGACC CGGGCTACCA GCGCTTCTTC
TCGTACATCT CGCTGTTCAC CTTCTCGATG CTGATGCTCG TGATGAGCAA CAACTTCCTG
CAGCTGTTCT TCGGCTGGGA AGCGGTCGGC CTGGTGTCCT ACCTGCTGAT CGGCTTCTGG
TTCAAGCGGC CGACGGCGAT CTTCGCCAAC ATGAAGGCCT TCCTGGTCAA CCGCGTGGGT
GACTTCGGCT TCATCCTCGG CATCGGCCTG ATCGTCGCCT ATGCCGGCAC GCTGAGCTAC
GCCGAGGCCT TTGCCAAGGC CCCGGAACTG GCCAAGCTGG TGTTCCCCGG CACCGAGTGG
ATGCTGATCA CGGTCACCTG CATCTGCCTG TTCATCGGCG CGATGGGCAA GAGCGCGCAG
TTCCCGCTGC ACGTCTGGCT GCCCGACTCG ATGGAAGGCC CGACCCCGAT CTCGGCGCTG
ATCCACGCCG CCACGATGGT GACGGCCGGC ATCTTCATGG TGGCGCGCAT GTCGCCGCTG
TTCGAGCTGT CCGACACGGC TCTGAATTTC ATCCTGATCA TCGGCGCGAT CACCGGCCTG
TTCATGGGCT TCCTGGGCAT CATCCAGAAC GACATCAAGC GCGTGGTCGC GTATTCGACG
CTGTCGCAGC TCGGCTACAT GACGATGGCG CTGGGTGCCT CGGCCTACTC GGTCGCTGTG
TTCCACCTGA TGACGCACGC CTTCTTCAAG GCCCTGCTGT TCCTGGGTGC GGGCTCGGTG
ATCATCGGCA TGCACCACGA TCAGGACATC CGCAACATGG GCGGCCTGCG CAAGTACATG
CCCATCACCT GGATCACCTC GCTGCTGGGC TCGCTGGCGC TGATCGGCAC GCCGCTGTTC
TCGGGCTTCT ACTCGAAGGA TTCGATCATC GAGGCGCTGC ACGCCAGCCA CCTGCCGGCC
GCGCACTGGG CCTACTGGGC CGCGGTGATC GGCGTGTTCG TGACCGCGTT CTATTCGTTC
CGGATGTACT TCCTGGTTTT CCACGGCAAG GAACATTTCC ATCACAAGCC CTTCCCGGCA
GAAGACGATC ACGGCCACGA TGACCACGGC CATGCGCACA CGCCGCACGA GTCGCCCTGG
GTGGTCACGG CCCCGCTGGT GCTGCTGGCG ATCCCGTCGG TGGTGATCGG TTACCTGACG
ATCGGTCCGA TGCTGTACGG CGACTTCTTC AAGGATTCGA TCCTCGTCAA CGCCCAGCTG
CACCCGGCGA TGGACAAGCT CGCGGCCGGT TTCCACGGCG CTGCGGCGAT GGCGATGCAC
TCCCTGCAGA CGCTGCCGCT GTGGCTGGCC GTGGCCGGTG TCGGGACCTC GTACGTGTTC
TACATGCTGG TGCCGGCGAT TCCGCAGACG CTGGGCCGCG TGCTCTCTCC GCTGATCACC
GTGATGCAAA ACAAGTACTA CATGGACTGG ATCAACGAAA ACATCCTCGC CGCCGGAGCC
CGCATGCTCG GCCGCGGGCT CTGGAAGGGT GGTGACGTGG CGGTCATCGA CGGCGCCCTC
GTCAACGGCT CGGCACGCCT GGTGGGCTGG ATCGCATCGC TGGTGCGCCT GTTCCAGACC
GGCTACATCT ACCACTACGC ACTGGTCATG CTGATTGGCG TCTTCGCGCT GATGAGCTGG
TTCGTGTTCC AGTCGCGTTG A
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| Protein sequence | MSELSQSTLL AVPLAPLAGA VIAGFFGKTV GRRGSHVVTI LGVLIAFVLS VMTLLDVIGG
ARFNQTVYEW MVLGTLKMEV GFLVDGLTAM MMVVVTFVSL MVHIYTIGYM EEDPGYQRFF
SYISLFTFSM LMLVMSNNFL QLFFGWEAVG LVSYLLIGFW FKRPTAIFAN MKAFLVNRVG
DFGFILGIGL IVAYAGTLSY AEAFAKAPEL AKLVFPGTEW MLITVTCICL FIGAMGKSAQ
FPLHVWLPDS MEGPTPISAL IHAATMVTAG IFMVARMSPL FELSDTALNF ILIIGAITGL
FMGFLGIIQN DIKRVVAYST LSQLGYMTMA LGASAYSVAV FHLMTHAFFK ALLFLGAGSV
IIGMHHDQDI RNMGGLRKYM PITWITSLLG SLALIGTPLF SGFYSKDSII EALHASHLPA
AHWAYWAAVI GVFVTAFYSF RMYFLVFHGK EHFHHKPFPA EDDHGHDDHG HAHTPHESPW
VVTAPLVLLA IPSVVIGYLT IGPMLYGDFF KDSILVNAQL HPAMDKLAAG FHGAAAMAMH
SLQTLPLWLA VAGVGTSYVF YMLVPAIPQT LGRVLSPLIT VMQNKYYMDW INENILAAGA
RMLGRGLWKG GDVAVIDGAL VNGSARLVGW IASLVRLFQT GYIYHYALVM LIGVFALMSW
FVFQSR
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