| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1508 |
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| Symbol | |
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| ID | 6161398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1593814 |
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| End bp | 1594872 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641664263 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001790541 |
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| Protein GI | 171058192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00230102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGGACA CCCTGCAAAC ATTCGGAAGC GCGACGCTGG GCGGCGCCTG GCCTGTCGTC
TGGACCCTGC TCAAGATCGT CGTGGTGCTG CTGCCGCTGA TGGGCTGCGT GGCCTATCTG
ACGCTGTGGG AGCGCAAGGC GATCGGCTGG ACGCAGATCC GCCCGGGCCC CAACCGCGTC
GGCCCCTGGG GTCTGCTGAC CCCGATCGCC GATGCGGTCA AGCTGCTGTT CAAGGAAATC
ATCACCCCGA GCGCGGCCAA CAAGGGCCTG TTCTACCTCG GCCCGATCAT GACCATCATG
CCGGCGCTGG CCGCCTGGGC GGTGGTGCCG TTCGGCCCCG ACGTCGCGCT GGCCAACGTC
AACGCCGGCC TGCTGTTCCT GATGGCGATC ACCTCGATGG AGGTCTACGG CGTGATCATC
GCCGGCTGGG CCTCGAACTC GAAGTACGCC TTCCTGGGTG CGATGCGTGC GTCGGCCCAG
ATGGTCAGCT ACGAGATCGC GATGGGCTTC TGCTTCGTCG TCGTGCTGAT GGTCACCGGC
AGCCTGAACA TGACCGACAT CGTCGTCGGC CAGACCAAGG GCAACTTCGC GTCGATGGGG
CTGAACTTCC TGTCGTGGAA CTGGTTGCCG CTGTTCCCGA TCTTCATCGT CTACTTCATC
TCGGGCCTGG CTGAAACCAA CCGCCACCCG TTCGACGTGG TCGAAGGTGA AGCCGAGATC
GTGGCCGGTC ACATGATCGA GTACTCGGGC ATGTCGTTCG CGATGTTCTT CCTGGCCGAA
TACGCCAACA TGATCCTGGT CTCGGTGCTG GCCGTGATCA TGTTCCTCGG CGGCTGGGAT
GCACCGGTTT CCTTCCTGTC GTTCATTCCG GGCTGGATCT GGCTGGGCAT CAAGACCTTC
TGCGTGGCCA CGATGTTCCT GTGGGTGCGA GCCACCTTCC CGCGCTATCG CTACGACCAG
ATCATGCGTC TGGGCTGGAA GATCTTCATT CCGATCACGC TCGTGTGGCT GGTCGTGGTG
GGCCTGTGGA TCCAGTCGCC CTGGAATGTC TGGCTGTAA
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| Protein sequence | MLDTLQTFGS ATLGGAWPVV WTLLKIVVVL LPLMGCVAYL TLWERKAIGW TQIRPGPNRV
GPWGLLTPIA DAVKLLFKEI ITPSAANKGL FYLGPIMTIM PALAAWAVVP FGPDVALANV
NAGLLFLMAI TSMEVYGVII AGWASNSKYA FLGAMRASAQ MVSYEIAMGF CFVVVLMVTG
SLNMTDIVVG QTKGNFASMG LNFLSWNWLP LFPIFIVYFI SGLAETNRHP FDVVEGEAEI
VAGHMIEYSG MSFAMFFLAE YANMILVSVL AVIMFLGGWD APVSFLSFIP GWIWLGIKTF
CVATMFLWVR ATFPRYRYDQ IMRLGWKIFI PITLVWLVVV GLWIQSPWNV WL
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