Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1499 |
Symbol | |
ID | 6162413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1585147 |
End bp | 1585893 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641664253 |
Product | Triose-phosphate isomerase |
Protein accession | YP_001790532 |
Protein GI | 171058183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0165539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACGA ATCGCAAACT GGTGGTGGGC AACTGGAAGA TGCATGGCAG CCACGTTGCC AATGCCGAGT TGCTGCAAGG CGTGCTGGCC GCTCGGCCCT TTGGCTGCGA CGTGGCGGTG TGTGCGCCGT TCCCCTATCT GTCCGAGGTG GCGGTGACGC TGGCCGGCAG CCCTCTTCTG TGGGGTGCGC AGGATTGTTC GGCCCACGAG CAGGGCGCCT ACACCGGCGA GGTGTCGGCT GCGATGCTGG CCGAGTTTGG CTGCCGCTAT GTCATCGTCG GCCACTCGGA GCGGCGCGCC TATCACGCCG AATCCGACCA GCTGGTGGCC GACAAGGCCA AGGCCGCGCT GGCCCGAGGC ATCACGCCGA TCGTCTGCGT CGGCGAGACG CTGGCGCAGC GTGAGGCCGG TGAAACGGCA ACGGTGGTCA AGCGCCAGCT CTCGGTCGTG ATCCACGCCC TGACGCACTG CATCGGCGAA ATCGTGGTTG CCTACGAGCC GGTCTGGGCG ATCGGCACCG GTCGCACGGC CACCCCGGAA CAGGCTCAGG AAGTGCATGC CCTGCTGCGC GCCCAGCTGG CTGCCGCAAC GCCGCACGCC GCGCAGATGA AATTGCTCTA TGGCGGCAGC GTCAAGCCTG ACAACGCCGA CTCGCTGTTC GCTCAGCCCG ACATCGACGG TGGCCTGATC GGTGGCGCGG CGCTCAAGGC GGCCGACTTC GTCGCCATCG TGCGCGCAGC CGGCTGA
|
Protein sequence | MDTNRKLVVG NWKMHGSHVA NAELLQGVLA ARPFGCDVAV CAPFPYLSEV AVTLAGSPLL WGAQDCSAHE QGAYTGEVSA AMLAEFGCRY VIVGHSERRA YHAESDQLVA DKAKAALARG ITPIVCVGET LAQREAGETA TVVKRQLSVV IHALTHCIGE IVVAYEPVWA IGTGRTATPE QAQEVHALLR AQLAAATPHA AQMKLLYGGS VKPDNADSLF AQPDIDGGLI GGAALKAADF VAIVRAAG
|
| |