| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1492 |
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| Symbol | |
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| ID | 6162309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1576728 |
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| End bp | 1577561 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664246 |
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| Product | prolipoprotein diacylglyceryl transferase |
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| Protein accession | YP_001790525 |
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| Protein GI | 171058176 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
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| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00172406 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGTGC ATCCCCAGTT CAACCCGATC GCGCTCGATC TGGGCTTTTT CCAGATCCAC
TGGTATGGCC TGACGTATCT GGCGGCCTTC GGCTTGTTCT ATTTCCTGGC CACCCGGCGC
ATCCGCCAGG CGCCGTATGC AAGTGGATCG GGCCCGGCCT GGACGGCGCG TGATGTCGAG
GACCTGCTGT TTTTCGGCGT GGTCGGCGTG ATCCTGGGTG GGCGGCTCGG TTATGTGCTG
TTCTACAAGC CGACGTACTA CCTCGCCAAC CTCAGCGAGA TCCCCGCCGT CTGGAAGGGC
GGCATGGCTT TTCACGGCGG CCTGCTGGGC GTGATCGTGG CGATGGCGCT GTTTGCGCAT
CTGCGCGGGC GCAAGTTCTT CGAGGTCACT GACCTGGTCG CGCCCTGCGT GCCCACCGGC
CTGGCGATGG GCCGCATCGG CAACTTCATC AACGGCGAGC TGTGGGGCCG CGCGGCCGAC
GCCAGCCTGC CGTGGGCGAT GGTGTTCCCG CAGTCGGGCA GCGACCTGCC GCGCCACCCG
TCGCAGCTCT ACCAGTTCGC GCTCGAAGGC CTCGCGCTGT TCGCGCTCAC CTGGTTCTAC
GGCCACAGCC GCTCGGCCCA TGTCGGCGCC GACGGGCGGC CGATCTGGGG CCGGGTCAGC
GGCCTGTTCG TCGGCGGTTA CGGCGTGTTC CGCTTCATCG CCGAATACTT CCGCGAGCCC
GACAGCTTCC TCGGCCTGCT CGCGTTCAAC CTCAGCATGG GCCAGTGGCT GTGCGTGCCG
ATGATCGTGG CCGGCGCGCT GATCTGGTGG TCGGCGGGGC GGCGTCGTGT CTGA
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| Protein sequence | MLVHPQFNPI ALDLGFFQIH WYGLTYLAAF GLFYFLATRR IRQAPYASGS GPAWTARDVE
DLLFFGVVGV ILGGRLGYVL FYKPTYYLAN LSEIPAVWKG GMAFHGGLLG VIVAMALFAH
LRGRKFFEVT DLVAPCVPTG LAMGRIGNFI NGELWGRAAD ASLPWAMVFP QSGSDLPRHP
SQLYQFALEG LALFALTWFY GHSRSAHVGA DGRPIWGRVS GLFVGGYGVF RFIAEYFREP
DSFLGLLAFN LSMGQWLCVP MIVAGALIWW SAGRRRV
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