Gene Lcho_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1488 
Symbol 
ID6162226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1573231 
End bp1573536 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content66% 
IMG OID641664242 
Productcytochrome c class I 
Protein accessionYP_001790521 
Protein GI171058172 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.02284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT TGTTTGCACT GCTCGCCGCA TCGACCGCCC TGCTGGCCAG CCCTGCTTTC 
GCCAACCTCG AACTCGCGCA GAAGAAGGCC TGCATGGCCT GCCACGCCGT CGACAAGAAG
CTCGTCGGCC CGGGCTTCAA GGAAGTCGCC GCCAAGTACG CCGGCCAGAA GGACGCCGTC
GCCAAGCTGT CGGACAAGGT CATCAAGGGC GGCGCCGGCG TGTGGGGCCC GATCCCGATG
CCTGCCAACG CGATCACCGC CGACGAAGCC AAGACGCTCG TGACCTGGGT GCTGTCGCAG
AAGTGA
 
Protein sequence
MKPLFALLAA STALLASPAF ANLELAQKKA CMACHAVDKK LVGPGFKEVA AKYAGQKDAV 
AKLSDKVIKG GAGVWGPIPM PANAITADEA KTLVTWVLSQ K