| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1476 |
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| Symbol | |
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| ID | 6161581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1558716 |
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| End bp | 1559213 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664230 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001790509 |
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| Protein GI | 171058160 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0550713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA CCACGATGAC CGATTACGCG CTGCGCCTGC TGATGTACGT CGGCCAGCGC
CCCGAGCGCC TGTGCACCAT CGCCGAGGTG GCGCAGGCCT ACGGCATCTC CGAGGCGCAC
CTGATGAAGA TCACCCACCA GCTCGGCCTG GCCGGCTGGA TCGAGACGGT GCGTGGCAAG
GGCGGCGGCA TGCGGCTGGC GCTCGAGCCG GCGCAGATCA ACCTGGGTGA ACTGGTGCGC
AGCGTCGAGC CGGACTTCGC CCTGGTCGAA TGCCTGGCCA GCGGCAACGC CTGCTCGCTG
ACGGGCCGCT GCCGCCTGAC GGGCATCTTC GACGACGCGC TCGCGGCCTT CATGGAAAAG
CTCGACGCGC GCACGCTCGC CGAGGTGCTG CCGCCGCCGC GTCCGGCCTC GGCCGGCGAG
AGCCCGAGCT CACCCGATGG CGTCGTGACC CTGCCTTTGC CGGTGCGCAG CCGCCGCGCC
AGCGCAGCTC GGTCATGA
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| Protein sequence | MRLTTMTDYA LRLLMYVGQR PERLCTIAEV AQAYGISEAH LMKITHQLGL AGWIETVRGK
GGGMRLALEP AQINLGELVR SVEPDFALVE CLASGNACSL TGRCRLTGIF DDALAAFMEK
LDARTLAEVL PPPRPASAGE SPSSPDGVVT LPLPVRSRRA SAARS
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