| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1460 |
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| Symbol | |
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| ID | 6163314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1539661 |
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| End bp | 1540236 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664214 |
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| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
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| Protein accession | YP_001790493 |
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| Protein GI | 171058144 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.542713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTCGC TCAAACCCCT CTACCCGACG CACCAGCCGC GCAAGCTGAA GGTCGCGACC
GTCTCGCTGG CGGGCTGCTT CGGCTGCCAC ATGTCGTTTC TCGACATCGA CGAGCGGCTG
CTGGAGCTGA TCGAGCACAT CGAGTTCGAC CGCTCGCCGC TGACCGACAT CAAGCAGATC
GGCCACTGCG ACCTCGGCCT GATCGAGGGC GGGCTGTGCA ACTCCGAGAA CGTGGTGGTG
CTCAAGGAGT TTCGCGCCCA CTGCAAGACC CTCGTAGCGG TGGGCGCCTG CGCGATCAAC
GGCGGCCTGC CGGCGCAGCG CAACCACCTC GACCTGGCGC AGATGCTGCA CGACGTCTAT
CAGAGCCGCC CCGGCATGAC CGTCGGCAGC GTGATCCCCA ACGACCCCGA GCTGCCGCTG
CCGCTCAACA AGGTGCACCC GATCCACGAG GTGGTGCACG TCGACTACTT CCTGCCCGGC
TGCCCACCTT CGGCCGACGC GTTCTGGCAG TTCCTGACCG ACCTGATGGC GGGCCGCACG
CCGCATCTGG GCCACGGTCT GATGCATTAC GACTGA
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| Protein sequence | MNSLKPLYPT HQPRKLKVAT VSLAGCFGCH MSFLDIDERL LELIEHIEFD RSPLTDIKQI
GHCDLGLIEG GLCNSENVVV LKEFRAHCKT LVAVGACAIN GGLPAQRNHL DLAQMLHDVY
QSRPGMTVGS VIPNDPELPL PLNKVHPIHE VVHVDYFLPG CPPSADAFWQ FLTDLMAGRT
PHLGHGLMHY D
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