Gene Lcho_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1456 
Symbol 
ID6162850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1536379 
End bp1536759 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content66% 
IMG OID641664210 
Productlipoprotein 
Protein accessionYP_001790489 
Protein GI171058140 
COG category[S] Function unknown 
COG ID[COG4259] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC ACACACTGAT CCGGCCGCTC GCCTGGGCGG CCCTGCTCGG CACCAGCCTG 
CTGGCCTGCG GCTGCGTCAA CCGCCCGCCC TCGCTCTACG AATGGGGTGG CTATCAGCCG
CAGGTCTACG AGTACTTCAA GTCCGACAGC AAGGGCCCCG AAGCCCAGGC CAGCGTGCTC
GAGGCCGACC TGCAGAAGAT CGCCGCCAAG GGTGCCAAGC CGCCACCGGG CTACCACGCC
CACCTGGGCC TGCTGTACGC CAACATGGGC CGCGACGACC AGGCCGTACA GTCCTTCCAG
GCCGAGAAGG CGCTGTTCCC GGAAGCGGCG CACTACATGG ACTTCCTGCT GGTCAAGGGC
AAGGACAAGG ACAAGAAATG A
 
Protein sequence
MSKHTLIRPL AWAALLGTSL LACGCVNRPP SLYEWGGYQP QVYEYFKSDS KGPEAQASVL 
EADLQKIAAK GAKPPPGYHA HLGLLYANMG RDDQAVQSFQ AEKALFPEAA HYMDFLLVKG
KDKDKK