Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1456 |
Symbol | |
ID | 6162850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1536379 |
End bp | 1536759 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641664210 |
Product | lipoprotein |
Protein accession | YP_001790489 |
Protein GI | 171058140 |
COG category | [S] Function unknown |
COG ID | [COG4259] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC ACACACTGAT CCGGCCGCTC GCCTGGGCGG CCCTGCTCGG CACCAGCCTG CTGGCCTGCG GCTGCGTCAA CCGCCCGCCC TCGCTCTACG AATGGGGTGG CTATCAGCCG CAGGTCTACG AGTACTTCAA GTCCGACAGC AAGGGCCCCG AAGCCCAGGC CAGCGTGCTC GAGGCCGACC TGCAGAAGAT CGCCGCCAAG GGTGCCAAGC CGCCACCGGG CTACCACGCC CACCTGGGCC TGCTGTACGC CAACATGGGC CGCGACGACC AGGCCGTACA GTCCTTCCAG GCCGAGAAGG CGCTGTTCCC GGAAGCGGCG CACTACATGG ACTTCCTGCT GGTCAAGGGC AAGGACAAGG ACAAGAAATG A
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Protein sequence | MSKHTLIRPL AWAALLGTSL LACGCVNRPP SLYEWGGYQP QVYEYFKSDS KGPEAQASVL EADLQKIAAK GAKPPPGYHA HLGLLYANMG RDDQAVQSFQ AEKALFPEAA HYMDFLLVKG KDKDKK
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